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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link A0A0F6BZQ3
Original Database ID tr C3TMN7
Organism Escherichia coli, Shigella sonnei, etc.
Annotation subname: full=putative dna-binding
transcriptional regulator {eco:0000313|embl:a
fj27459.1};
Sequence Length 222

Dataset Information:

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Model Information

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Target Region17-220
Protein Length222
Template PDB Code1zybA
Template Region8-219
Sequence Identity13%
E-Value 0
GA3410.78
MPQS1.14
z-DOPE-0.52
DatasetE.coli_1
ModPipe VersionModPipe2.0
Model Date2006-10-17

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1zybcrystal structure of transcription regulator from bacteroides thetaiotaomicron vpi-5482 at 2.15 a resolution
DBALI1zybA 
JenaImageLibrary1zyb 
Target Sequence
UniProtKBF4TAM7SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:EGI23093.1};
InterProF4TAM7 
PFAMF4TAM7 
ProdomF4TAM7 
UniProtKBD8AL98SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EFK16102.1};
InterProD8AL98 
PFAMD8AL98 
ProdomD8AL98 
UniProtKBD7ZV11SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EFK25289.1};
InterProD7ZV11 
PFAMD7ZV11 
ProdomD7ZV11 
UniProtKBC4ZTD4SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZTD4 
PFAMC4ZTD4 
ProdomC4ZTD4 
UniProtKBD7Y399SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EFJ97904.1};
InterProD7Y399 
PFAMD7Y399 
ProdomD7Y399 
UniProtKBA0A0F6F1R0SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:AJA24350.1};
InterProA0A0F6F1R0 
PFAMA0A0F6F1R0 
ProdomA0A0F6F1R0 
UniProtKBD7XKG2SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EFJ88200.1};
InterProD7XKG2 
PFAMD7XKG2 
ProdomD7XKG2 
UniProtKBD6I6I3SubName: Full=YaiV protein {ECO:0000313|EMBL:EFF06656.2};
InterProD6I6I3 
PFAMD6I6I3 
ProdomD6I6I3 
UniProtKBC3TMN7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCJ42852.1};
InterProC3TMN7 
PFAMC3TMN7 
ProdomC3TMN7 
UniProtKBF4SIY5SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:EGI09905.1};
InterProF4SIY5 
PFAMF4SIY5 
ProdomF4SIY5 
UniProtKBU9XN76SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:ESA61692.1};
InterProU9XN76 
PFAMU9XN76 
ProdomU9XN76 
UniProtKBV1AM44SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:ESD97963.1};
InterProV1AM44 
PFAMV1AM44 
ProdomV1AM44 
UniProtKBB7L525SubName: Full=YaiV protein {ECO:0000313|EMBL:CAU96253.1};
InterProB7L525 
PFAMB7L525 
ProdomB7L525 
UniProtKBB1XEW4SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XEW4 
PFAMB1XEW4 
ProdomB1XEW4 
UniProtKBJ7RCY2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCK45527.1};
InterProJ7RCY2 
PFAMJ7RCY2 
ProdomJ7RCY2 
UniProtKBI1ZQY5SubName: Full=Putative DNA-binding transcriptional regulator;
InterProI1ZQY5 
PFAMI1ZQY5 
ProdomI1ZQY5 
UniProtKBD8B6X5SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EFJ65151.1};
InterProD8B6X5 
PFAMD8B6X5 
ProdomD8B6X5 
UniProtKBV0XTS8SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:ESD70889.1};
InterProV0XTS8 
PFAMV0XTS8 
ProdomV0XTS8 
UniProtKBE1IZP5SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EFK70773.1};
InterProE1IZP5 
PFAME1IZP5 
ProdomE1IZP5 
UniProtKBE6BHJ6SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EFU36159.1};
InterProE6BHJ6 
PFAME6BHJ6 
ProdomE6BHJ6 
UniProtKBA0A0F6BZQ3SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AFJ27459.1};
InterProA0A0F6BZQ3 
PFAMA0A0F6BZQ3 
ProdomA0A0F6BZQ3 
UniProtKBE1HRU1SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EFK89358.1};
InterProE1HRU1 
PFAME1HRU1 
ProdomE1HRU1 
UniProtKBE6NXY3SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProE6NXY3 
PFAME6NXY3 
ProdomE6NXY3 
UniProtKBQ3Z536SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AAZ87126.1};
InterProQ3Z536 
PFAMQ3Z536 
ProdomQ3Z536 
UniProtKBC3TMN7SubName: Full=Putative uncharacterized protein;
InterProC3TMN7 
PFAMC3TMN7 
ProdomC3TMN7 
UniProtKBE6NXY3SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProE6NXY3 
PFAME6NXY3 
ProdomE6NXY3 
UniProtKBB7L525SubName: Full=Putative uncharacterized protein yaiV;
InterProB7L525 
PFAMB7L525 
ProdomB7L525 
UniProtKBB1XEW4SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XEW4 
PFAMB1XEW4 
ProdomB1XEW4 
UniProtKBD7XKG2SubName: Full=Putative uncharacterized protein;
InterProD7XKG2 
PFAMD7XKG2 
ProdomD7XKG2 
UniProtKBA0A1S9JM89Inhibitor of hydrogen peroxide resistance {ECO:0000256|HAMAP-Rule:MF_02072}
InterProA0A1S9JM89 
PFAMA0A1S9JM89 
ProdomA0A1S9JM89 
UniProtKBI1ZQY5SubName: Full=Putative DNA-binding transcriptional regulator;
InterProI1ZQY5 
PFAMI1ZQY5 
ProdomI1ZQY5 
UniProtKBE6BHJ6SubName: Full=Putative inner membrane protein;
InterProE6BHJ6 
PFAME6BHJ6 
ProdomE6BHJ6 
UniProtKBQ3Z536SubName: Full=Putative uncharacterized protein yaiV;
InterProQ3Z536 
PFAMQ3Z536 
ProdomQ3Z536 
UniProtKBD7Y399SubName: Full=Putative uncharacterized protein;
InterProD7Y399 
PFAMD7Y399 
ProdomD7Y399 
UniProtKBQ2MC50Predicted DNA-binding transcriptional regulator
InterProQ2MC50 
PFAMQ2MC50 
ProdomQ2MC50 
UniProtKBD7ZV11SubName: Full=Putative uncharacterized protein;
InterProD7ZV11 
PFAMD7ZV11 
ProdomD7ZV11 
UniProtKBA0A1X3J6G7Inhibitor of hydrogen peroxide resistance {ECO:0000256|HAMAP-Rule:MF_02072}
InterProA0A1X3J6G7 
PFAMA0A1X3J6G7 
ProdomA0A1X3J6G7 
UniProtKBD8AL98SubName: Full=Putative uncharacterized protein;
InterProD8AL98 
PFAMD8AL98 
ProdomD8AL98 
UniProtKBE1HRU1SubName: Full=Putative uncharacterized protein;
InterProE1HRU1 
PFAME1HRU1 
ProdomE1HRU1 
UniProtKBD8B6X5SubName: Full=Putative uncharacterized protein;
InterProD8B6X5 
PFAMD8B6X5 
ProdomD8B6X5 
UniProtKBE1IZP5SubName: Full=Putative uncharacterized protein;
InterProE1IZP5 
PFAME1IZP5 
ProdomE1IZP5 
UniProtKBD6I6I3SubName: Full=YaiV protein;
InterProD6I6I3 
PFAMD6I6I3 
ProdomD6I6I3 
UniProtKBF4SIY5SubName: Full=Putative inner membrane protein;
InterProF4SIY5 
PFAMF4SIY5 
ProdomF4SIY5 
UniProtKBA0A1X3JLB2Inhibitor of hydrogen peroxide resistance {ECO:0000256|HAMAP-Rule:MF_02072}
InterProA0A1X3JLB2 
PFAMA0A1X3JLB2 
ProdomA0A1X3JLB2 
UniProtKBC4ZTD4SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZTD4 
PFAMC4ZTD4 
ProdomC4ZTD4 
UniProtKBF4TAM7SubName: Full=Putative inner membrane protein;
InterProF4TAM7 
PFAMF4TAM7 
ProdomF4TAM7 
UniProtKBP0AAP5.1YAIV_ECOLI RecName: Full=Uncharacterized protein yaiV
InterProP0AAP5.1 
PFAMP0AAP5.1 
ProdomP0AAP5.1 
UniProtKBP0AAP6RecName: Full=Uncharacterized protein yaiV;
InterProP0AAP6 
PFAMP0AAP6 
ProdomP0AAP6 
UniProtKBP77723RecName: Full=Uncharacterized protein yaiV;
InterProP77723 
PFAMP77723 
ProdomP77723 
UniProtKBP0AAP6.1YAIV_ECO57 RecName: Full=Uncharacterized protein yaiV
InterProP0AAP6.1 
PFAMP0AAP6.1 
ProdomP0AAP6.1 
UniProtKBP0AAP5RecName: Full=Uncharacterized protein yaiV;
InterProP0AAP5 
PFAMP0AAP5 
ProdomP0AAP5 
UniProtKBQ2MC50RecName: Full=Uncharacterized protein yaiV;
InterProQ2MC50 
PFAMQ2MC50 
ProdomQ2MC50 
RefSeqNP_286113.1 putative DNA-binding transcriptional regulator [Escherichia coli O157:H7 EDL933]
RefSeqNP_308452.1 putative DNA-binding transcriptional regulator [Escherichia coli O157:H7 str. Sakai]
RefSeqNP_414909.1 predicted DNA-binding transcriptional regulator [Escherichia coli K12]
RefSeqAP_001026.1 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_001729282.1 DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. DH10B]
RefSeqZP_07170097.1 hypothetical protein HMPREF9547_03653 [Escherichia coli MS 175-1]
RefSeqZP_00728353.1 COG2186: Transcriptional regulators [Escherichia coli E22]
RefSeqYP_309361.1 putative DNA-binding transcriptional regulator [Shigella sonnei Ss046]
RefSeqYP_002925461.1 putative DNA-binding transcriptional regulator [Escherichia coli BW2952]
RefSeqYP_002401500.1 putative DNA-binding transcriptional regulator [Escherichia coli 55989]
RefSeqZP_06656274.1 yaiV protein [Escherichia coli B185]
RefSeqZP_07145748.1 conserved hypothetical protein [Escherichia coli MS 187-1]
RefSeqZP_07162128.1 conserved hypothetical protein [Escherichia coli MS 116-1]
RefSeqZP_07247104.1 conserved hypothetical protein [Escherichia coli MS 146-1]
RefSeqZP_07121295.1 hypothetical protein HMPREF9536_01502 [Escherichia coli MS 84-1]
RefSeqZP_07134856.1 conserved hypothetical protein [Escherichia coli MS 115-1]
RefSeqZP_07207651.1 hypothetical protein HMPREF9347_00072 [Escherichia coli MS 124-1]
GenPept300404662 hypothetical protein HMPREF9536_01502 [Escherichia coli MS 84-1]
GenPept300414594 conserved hypothetical protein [Escherichia coli MS 115-1]
GenPept209744472hypothetical protein ECs0425
GenPept15800101 putative DNA-binding transcriptional regulator [Escherichia coli O157:H7 EDL933]
GenPept1657570hypothetical protein
GenPept169887797predicted DNA-binding transcriptional regulator
GenPept218693833 putative DNA-binding transcriptional regulator [Escherichia coli 55989]
GenPept209744466hypothetical protein ECs0425
GenPept209744468hypothetical protein ECs0425
GenPept218350565conserved hypothetical protein
GenPept12513212AE005216_9 orf, hypothetical protein
GenPept300452482 conserved hypothetical protein [Escherichia coli MS 116-1]
GenPept300461796 conserved hypothetical protein [Escherichia coli MS 187-1]
GenPept300843013 hypothetical protein HMPREF9347_00072 [Escherichia coli MS 124-1]
GenPept85674516predicted DNA-binding transcriptional regulator
GenPept77416713YAIV_ECOLI RecName: Full=Uncharacterized protein yaiV
GenPept75256748 COG2186: Transcriptional regulators [Escherichia coli E22]
GenPept7467026G64765 yaiV protein - Escherichia coli
GenPept77416712YAIV_ECO57 RecName: Full=Uncharacterized protein yaiV
GenPept74310942 putative DNA-binding transcriptional regulator [Shigella sonnei Ss046]
GenPept73854419conserved hypothetical protein
GenPept734587149DNA-binding transcriptional regulator
GenPept687675564predicted DNA-binding transcriptional regulator
GenPept687671306predicted DNA-binding transcriptional regulator
GenPept666002158DNA-binding transcriptional regulator
GenPept557270779putative DNA-binding transcriptional regulator
GenPept300957928 hypothetical protein HMPREF9547_03653 [Escherichia coli MS 175-1]
GenPept300947983 conserved hypothetical protein [Escherichia coli MS 116-1]
GenPept300930336 conserved hypothetical protein [Escherichia coli MS 187-1]
GenPept300918251 conserved hypothetical protein [Escherichia coli MS 115-1]
GenPept300903367 hypothetical protein HMPREF9536_01502 [Escherichia coli MS 84-1]