University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 15142749
Original Database ID TR TKT1_ECOLI
Organism Escherichia coli, Escherichia coli K-12
Annotation unnamed protein product
Sequence Length 663

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region2-663
Protein Length663
Template PDB Code1qgdA
Template Region2-663
Sequence Identity100%
E-Value1e-171
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1qgdtransketolase from escherichia coli ; EC: 2.2.1.1 ; PFAM: PF00456 PF02779 PF02780
DBALI1qgdA 
CATH3.40.50.970 Domain: 1qgdA01 Rossmann fold (100%)
CATH3.40.50.970 Domain: 1qgdA02 Rossmann fold (100%)
CATH3.40.50.920 Domain: 1qgdA03 Rossmann fold (100%)
JenaImageLibrary1qgd 
Target Sequence
UniProtKBP27302Transketolase 1 (EC 2.2.1.1) (TK 1)
InterProP27302 
PFAMP27302 
ProdomP27302 
GenPept7427898XJECTK transketolase (EC 2.2.1.1) A - Escherichia coli
GenPept62817017unnamed protein product
GenPept449699275Sequence 10 from patent US 8372621
GenPept314379148Sequence 10 from patent US 7790431
GenPept2827767TKT1_ECOLI TRANSKETOLASE 1 (TK 1)
GenPept2367177transketolase 1 isozyme
GenPept167296746Sequence 23548 from patent US 7314974
GenPept16130836 (NC_000913) transketolase 1 isozyme [Escherichia coli K12]
GenPept15142749unnamed protein product