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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A8K3K6
Original Database ID EN ENSP00000499418.1
Organism Homo sapiens
Annotation subname: full=cdna flj77070, highly
similar to homo sapiens troponin
t type 2 (c ardiac) (tnnt2), transcript
variant 2, mrna;
Sequence Length 288

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region2-256
Protein Length288
Template PDB Code1u4qA
Template Region1735-1979
Sequence Identity17%
E-Value0
GA3411
MPQS1.07812
z-DOPE-0.45
TSVMod MethodMSALL
TSVMod RMSD8.1
TSVMod NO350.266
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1u4qcrystal structure of repeats 15, 16 and 17 of chicken brain alpha spectrin
DBALI1u4qA 
CATH1.20.58.60 Domain: 1u4qA01 Methane Monooxygenase Hydroxylase; Chain G, domain 1 (31%)
CATH1.20.58.60 Domain: 1u4qA02 Methane Monooxygenase Hydroxylase; Chain G, domain 1 (100%)
CATH1.20.58.60 Domain: 1u4qA03 Methane Monooxygenase Hydroxylase; Chain G, domain 1 (100%)
JenaImageLibrary1u4q 
Target Sequence
UniProtKBA8K3K6SubName: Full=cDNA FLJ77070, highly similar to Homo sapiens troponin T type 2 (cardiac) (TNNT2), transcript variant 2, mRNA;
InterProA8K3K6 
PFAMA8K3K6 
ProdomA8K3K6 
RefSeqNP_001001430.1 troponin T, cardiac muscle isoform 2 [Homo sapiens]
PDB7UTIcIsoform 6 of Troponin T, cardiac muscle
PDB7UTIdIsoform 6 of Troponin T, cardiac muscle
PDB7UTIXIsoform 6 of Troponin T, cardiac muscle
PDB7UTIYIsoform 6 of Troponin T, cardiac muscle
PDB7UTLeIsoform 6 of Troponin T, cardiac muscle
PDB7UTLfIsoform 6 of Troponin T, cardiac muscle
PDB7UTLXIsoform 6 of Troponin T, cardiac muscle
PDB7UTLYIsoform 6 of Troponin T, cardiac muscle
GenPept685178troponin T cardiac isoform
GenPept5979275Sequence 6 from patent US 5834210
GenPept568532319Sequence 14828 from patent US 8586006
GenPept510602cardiac troponin T
GenPept48255879 troponin T, cardiac muscle isoform 2 [Homo sapiens]
GenPept155703417Sequence 9400 from patent US 7235358
GenPept158254674unnamed protein product
GenPept27290537Sequence 7 from patent US 6475785
GenPept294588757Sequence 2515 from patent US 7691569
GenPept29692968Sequence 4 from patent US 6491923
GenPept331402104Sequence 2515 from patent US 7879556
GenPept331402399Sequence 12517 from patent US 7879556
GenPept331467214Sequence 2515 from patent US 7892745
GenPept331467509Sequence 12517 from patent US 7892745
GenPept348049188Sequence 16 from patent US 8008021
GenPept4507627 troponin T2, cardiac; Troponin-T2, cardiac [Homo sapiens]
GenPept1174802TRT2_HUMAN TROPONIN T, CARDIAC MUSCLE ISOFORMS (TNTC)
GenBankAAA67422.1 troponin T cardiac isoform [Homo sapiens]
EMBLCAA52818.1 
UCSCGenomeBrowserP45379 
ENSEMBLENSP00000356287