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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0N0L4
Original Database ID sp P40189
Organism Homo sapiens
Annotation subname: full=interleukin 6 signal
transducer (gp130, oncostatin
m receptor) (in terleukin 6 signal
transducer (gp130, oncostatin
m receptor), isoform ...
Sequence Length 918

Dataset Information:

The newest dataset for this sequence was created on 2020-09-11. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region24-612
Protein Length918
Template PDB Code3l5hA
Template Region2-590
Sequence Identity100%
E-Value0
GA3411
MPQS1.66711
z-DOPE0.52
TSVMod MethodMSALL
TSVMod RMSD5.652
TSVMod NO350.703
DatasetMW-sars_cov_2
ModPipe VersionSVN.r1701
Model Date2020-09-11

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3l5hcrystal structure of the full ectodomain of human gp130: new insights into the molecular assembly of receptor complexes
DBALI3l5hA 
JenaImageLibrary3l5h 
Target Sequence
UniProtKBQ9UQ41RecName: Full=Interleukin-6 receptor subunit beta;Short=IL-6 receptor subunit beta;Short=IL-6R subunit beta;Short=IL-6R-beta;Short=IL-6RB;AltName: Full=CDw130;AltName: Full=Interleukin-6 signal transd
InterProQ9UQ41 
PFAMQ9UQ41 
ProdomQ9UQ41 
UniProtKBQ5FC04RecName: Full=Interleukin-6 receptor subunit beta;Short=IL-6 receptor subunit beta;Short=IL-6R subunit beta;Short=IL-6R-beta;Short=IL-6RB;AltName: Full=CDw130;AltName: Full=Interleukin-6 signal transd
InterProQ5FC04 
PFAMQ5FC04 
ProdomQ5FC04 
UniProtKBP40189RecName: Full=Interleukin-6 receptor subunit beta;Short=IL-6 receptor subunit beta;Short=IL-6R subunit beta;Short=IL-6R-beta;Short=IL-6RB;AltName: Full=CDw130;AltName: Full=Interleukin-6 signal transd
InterProP40189 
PFAMP40189 
ProdomP40189 
UniProtKBA0N0L4RecName: Full=Interleukin-6 receptor subunit beta;Short=IL-6 receptor subunit beta;Short=IL-6R subunit beta;Short=IL-6R-beta;Short=IL-6RB;AltName: Full=CDw130;AltName: Full=Interleukin-6 signal transd
InterProA0N0L4 
PFAMA0N0L4 
ProdomA0N0L4 
UniProtKBA0N0L4SubName: Full=Interleukin 6 signal transducer (Gp130, oncostatin M receptor) (Interleukin 6 signal transducer (Gp130, oncostatin M receptor), isoform CRA_a);
InterProA0N0L4 
PFAMA0N0L4 
ProdomA0N0L4 
UniProtKBQ9UQ41RecName: Full=Interleukin-6 receptor subunit beta;Short=IL-6 receptor subunit beta;Short=IL-6R subunit beta;Short=IL-6R-beta;Short=IL-6RB;AltName: Full=CDw130;AltName: Full=Interleukin-6 signal transd
InterProQ9UQ41 
PFAMQ9UQ41 
ProdomQ9UQ41 
UniProtKBQ5FC04RecName: Full=Interleukin-6 receptor subunit beta;Short=IL-6 receptor subunit beta;Short=IL-6R subunit beta;Short=IL-6R-beta;Short=IL-6RB;AltName: Full=CDw130;AltName: Full=Interleukin-6 signal transd
InterProQ5FC04 
PFAMQ5FC04 
ProdomQ5FC04 
UniProtKBP40189RecName: Full=Interleukin-6 receptor subunit beta;Short=IL-6 receptor subunit beta;Short=IL-6R subunit beta;Short=IL-6R-beta;Short=IL-6RB;AltName: Full=CDw130;AltName: Full=Interleukin-6 signal transd
InterProP40189 
PFAMP40189 
ProdomP40189 
UniProtKBP40189.2IL6RB_HUMAN RecName: Full=Interleukin-6 receptor subunit beta; Short=IL-6 receptor subunit beta; Short=IL-6R subunit beta; Short=IL-6R-beta; Short=IL-6RB; AltName: Full=CDw130; AltName: Full=Interleuk
InterProP40189.2 
PFAMP40189.2 
ProdomP40189.2 
UniProtKBA0N0L4RecName: Full=Interleukin-6 receptor subunit beta;Short=IL-6 receptor subunit beta;Short=IL-6R subunit beta;Short=IL-6R-beta;Short=IL-6RB;AltName: Full=CDw130;AltName: Full=Interleukin-6 signal transd
InterProA0N0L4 
PFAMA0N0L4 
ProdomA0N0L4 
RefSeqNP_002175.2 interleukin-6 receptor subunit beta isoform 1 precursor [Homo sapiens]
GenPept168278002interleukin-6 receptor subunit beta precursor, partial
GenPept119575331interleukin 6 signal transducer (gp130, oncostatin M receptor), isoform CRA_a
GenPept215273999IL6RB_HUMAN RecName: Full=Interleukin-6 receptor subunit beta; Short=IL-6 receptor subunit beta; Short=IL-6R subunit beta; Short=IL-6R-beta; Short=IL-6RB; AltName: Full=CDw130; AltName: Full=Interleuk
GenPept117606496interleukin 6 signal transducer (gp130, oncostatin M receptor)
GenPept197069637Sequence 5 from patent US 7410781
GenPept915810921Sequence 166 from patent US 9005620
GenPept568531318Sequence 12268 from patent US 8586006
GenPept396990837Sequence 166 from patent US 8198414
GenPept389712754Sequence 58 from patent US 8153128
GenPept28610147 interleukin-6 receptor subunit beta isoform 1 precursor [Homo sapiens]
GenBankABK41905.1 interleukin 6 signal transducer (gp130, oncostatin M receptor) [Homo sapiens]
GenBankEAW54936.1 interleukin 6 signal transducer (gp130, oncostatin M receptor), isoform CRA_a [Homo sapiens]
ENSEMBLENSP00000338799Interleukin-6 receptor beta chain precursor (IL-6R-beta) (Interleukin 6 signal transducer) (Membrane glycoprotein 130) (gp130) (Oncostatin M receptor) (CDw130) (CD130 antigen). [Homo sapiens]
ENSEMBLENSP00000338799 
ENSEMBLENSP00000338799TDI sequence
ENSEMBLENSP00000370698