University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P19319
Original Database ID TR NARZ_ECOLI
Organism Escherichia coli
Annotation respiratory nitrate reductase
2 alpha chain (ec 1.7.99.4)
Sequence Length 1245

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region1-1243
Protein Length1245
Template PDB Code1q16A
Template Region1-1244
Sequence Identity79%
E-Value0
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1q16crystal structure of nitrate reductase a, narghi, from escherichia coli
DBALI1q16A 
CATH4.10.1200.10 Domain: 1q16A01 nitrate reductase tail (100%)
CATH2.20.25.90 Domain: 1q16A03 ADC-like domains (100%)
CATH3.40.50.740 Domain: 1q16A05 Rossmann fold (100%)
CATH3.40.228.10 Domain: 1q16A07 Dimethylsulfoxide Reductase, domain 2 (100%)
CATH2.40.40.20 Domain: 1q16A13 Barwin-like endoglucanases (100%)
JenaImageLibrary1q16 
Target Sequence
UniProtKBP19319Respiratory nitrate reductase 2 alpha chain (EC 1.7.99.4)
InterProP19319 
PFAMP19319 
ProdomP19319 
GenPept1742400Respiratory nitrate reductase 2 a chain (EC 1.7.99.4)