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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 119587035
Original Database ID EN ENSP00000075430.7
Organism Homo sapiens
Annotation ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit 1, isoform
cra_d
Sequence Length 867

Dataset Information:

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Model Information

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Target Region171-349
Protein Length867
Template PDB Code2ghtA
Template Region79-252
Sequence Identity20%
E-Value 0
GA3410.99
MPQS0.32
z-DOPE-0.61
DatasetHIV_Sequences
ModPipe Versionsvn-r432
Model Date2008-07-30

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2ghtctd-specific phosphatase scp1 in complex with peptide from c-terminal domain of rna polymerase ii
DBALI2ghtA 
CATH3.40.50.1000 Domain: 2ghtA00 Rossmann fold (97%)
JenaImageLibrary2ght 
Target Sequence
RefSeqNP_430255.2 RNA polymerase II subunit A C-terminal domain phosphatase isoform FCP1b [Homo sapiens]
GenPept119587035CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, isoform CRA_d
GenPept67188550 RNA polymerase II subunit A C-terminal domain phosphatase isoform FCP1b [Homo sapiens]
GenBankEAW66631.1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, isoform CRA_d [Homo sapiens]
ENSEMBLENSP00000075430RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase). [Homo sapiens]
ENSEMBLENSP00000075430 
ENSEMBLENSP00000075430TDI sequence
ENSEMBLENSP00000075430