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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 119587035
Original Database ID EN ENSP00000075430.7
Organism Homo sapiens
Annotation ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit 1, isoform
cra_d
Sequence Length 867

Dataset Information:

The newest dataset for this sequence was created on 2013-10-23. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region168-355
Protein Length867
Template PDB Code3ef0A
Template Region150-417
Sequence Identity42%
E-Value0
GA3411
MPQS0.71964
z-DOPE-1.06
TSVMod MethodMSALL
TSVMod RMSD3.358
TSVMod NO350.819
DatasetH_sapiens_2013_D1
ModPipe VersionSVN.r1513
Model Date2013-10-23

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3ef0the structure of fcp1, an essential rna polymerase ii ctd phosphatase
DBALI3ef0A 
JenaImageLibrary3ef0 
Target Sequence
RefSeqNP_430255.2 RNA polymerase II subunit A C-terminal domain phosphatase isoform FCP1b [Homo sapiens]
GenPept119587035CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, isoform CRA_d
GenPept67188550 RNA polymerase II subunit A C-terminal domain phosphatase isoform FCP1b [Homo sapiens]
GenBankEAW66631.1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, isoform CRA_d [Homo sapiens]
ENSEMBLENSP00000075430RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase). [Homo sapiens]
ENSEMBLENSP00000075430 
ENSEMBLENSP00000075430TDI sequence
ENSEMBLENSP00000075430