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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 39645774
Original Database ID GI 39645774
Organism Homo sapiens
Annotation ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit 1
Sequence Length 867

Dataset Information:

The newest dataset for this sequence was created on 2013-02-24. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region168-344
Protein Length867
Template PDB Code3ef0A
Template Region150-406
Sequence Identity44%
E-Value0
GA3411
MPQS0.730052
z-DOPE-1.02
TSVMod MethodMSALL
TSVMod RMSD2.934
TSVMod NO350.843
DatasetHAD
ModPipe VersionSVN.r1409M
Model Date2013-02-24

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3ef0the structure of fcp1, an essential rna polymerase ii ctd phosphatase
DBALI3ef0A 
JenaImageLibrary3ef0 
Target Sequence
SFLD39645774Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
GenPept39645774CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
GenBankAAH63447.1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 [Homo sapiens]