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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q9Y5B0
Original Database ID gi 5326898
Organism Homo sapiens
Annotation rna polymerase ii ctd phosphatase
Sequence Length 961

Dataset Information:

The newest dataset for this sequence was created on 2007-07-17. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region174-320
Protein Length961
Template PDB Code2q5eA
Template Region93-236
Sequence Identity19%
E-Value5e-29
GA3411
Datasetnysgxrc_2q5e_707
ModPipe VersionModPipe1.0
Model Date2007-07-17

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2q5ecrystal structure of human carboxy-terminal domain rna polymerase ii polypeptide a small phosphatase 2
DBALI2q5eA 
CATH3.40.50.1000 Domain: 2q5eA00 Rossmann fold (80%)
JenaImageLibrary2q5e 
Target Sequence
UniProtKBQ9Y5B0RNA polymerase II CTD phosphatase
InterProQ9Y5B0 
PFAMQ9Y5B0 
ProdomQ9Y5B0 
GenPept16554587 (NM_004715) CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, isoform FCP1a; CTD
GenPept5326898RNA polymerase II CTD phosphatase
GenPept915739026Sequence 1404 from patent US 8999633
GenBankAAD42088.1 RNA polymerase II CTD phosphatase [Homo sapiens]
UCSCGenomeBrowserQ9Y5B0