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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q9Y5B0.2
Original Database ID sp Q9Y5B0
Organism Homo sapiens
Annotation ctdp1_human recname: full=rna
polymerase ii subunit a c-terminal
domain phosphat ase; altname:
full=tfiif-associating ctd phosphatase
Sequence Length 961

Dataset Information:

The newest dataset for this sequence was created on 2007-08-06. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region171-353
Protein Length961
Template PDB Code2ghtA
Template Region79-256
Sequence Identity19%
E-Value 0
GA3411
MPQS0.37
z-DOPE-0.59
Datasethuman_4-2007
ModPipe VersionModPipe2.0
Model Date2007-08-06

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2ghtctd-specific phosphatase scp1 in complex with peptide from c-terminal domain of rna polymerase ii
DBALI2ghtA 
CATH3.40.50.1000 Domain: 2ghtA00 Rossmann fold (99%)
JenaImageLibrary2ght 
Target Sequence
UniProtKBQ7Z644RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ7Z644 
PFAMQ7Z644 
ProdomQ7Z644 
UniProtKBQ96BZ1RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ96BZ1 
PFAMQ96BZ1 
ProdomQ96BZ1 
UniProtKBQ9Y5B0RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ9Y5B0 
PFAMQ9Y5B0 
ProdomQ9Y5B0 
UniProtKBQ9Y5B0.2CTDP1_HUMAN RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase; AltName: Full=TFIIF-associating CTD phosphatase
InterProQ9Y5B0.2 
PFAMQ9Y5B0.2 
ProdomQ9Y5B0.2 
UniProtKBQ9Y6F5RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ9Y6F5 
PFAMQ9Y6F5 
ProdomQ9Y6F5 
GenPept46396052CTDP1_HUMAN RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase; AltName: Full=TFIIF-associating CTD phosphatase