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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A8MY97
Original Database ID EN ENSP00000484525.1
Organism Homo sapiens
Annotation recname: full=rna polymerase ii
subunit a c-terminal domain phosphatase;ec=3.1.3
.16;altname: full=tfiif-associating
ctd phosphatase;
Sequence Length 961

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region624-860
Protein Length961
Template PDB Code3t7kA
Template Region824-1061
Sequence Identity13%
E-Value0
GA3410.54
MPQS0.302218
z-DOPE0.08
TSVMod MethodMSALL
TSVMod RMSD7.807
TSVMod NO350.433
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3t7k
DBALI3t7kA 
JenaImageLibrary3t7k 
Target Sequence
UniProtKBQ9Y6F5RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ9Y6F5 
PFAMQ9Y6F5 
ProdomQ9Y6F5 
UniProtKBQ9Y5B0RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ9Y5B0 
PFAMQ9Y5B0 
ProdomQ9Y5B0 
UniProtKBA8MY97RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProA8MY97 
PFAMA8MY97 
ProdomA8MY97 
UniProtKBQ96BZ1RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ96BZ1 
PFAMQ96BZ1 
ProdomQ96BZ1 
UniProtKBQ7Z644RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ7Z644 
PFAMQ7Z644 
ProdomQ7Z644 
UniProtKBQ9Y6F5RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ9Y6F5 
PFAMQ9Y6F5 
ProdomQ9Y6F5 
UniProtKBQ9Y5B0RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ9Y5B0 
PFAMQ9Y5B0 
ProdomQ9Y5B0 
UniProtKBQ96BZ1RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ96BZ1 
PFAMQ96BZ1 
ProdomQ96BZ1 
UniProtKBQ7Z644RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProQ7Z644 
PFAMQ7Z644 
ProdomQ7Z644 
UniProtKBA8MY97RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase;EC=3.1.3.16;AltName: Full=TFIIF-associating CTD phosphatase;
InterProA8MY97 
PFAMA8MY97 
ProdomA8MY97 
RefSeqNP_004706.3 RNA polymerase II subunit A C-terminal domain phosphatase isoform FCP1a [Homo sapiens]
GenPept67188445 RNA polymerase II subunit A C-terminal domain phosphatase isoform FCP1a [Homo sapiens]
GenPept14759886 CTD (carboxy-terminal domina, RNA polymerase II, polypeptide A) phosphatase, subunit 1 [Homo sapiens]
GenPept119587032CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, isoform CRA_a
GenBankEAW66628.1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, isoform CRA_a [Homo sapiens]
ENSEMBLENSP00000299543RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase). [Homo sapiens]
ENSEMBLENSP00000299543 
ENSEMBLENSP00000299543TDI sequence
ENSEMBLENSP00000299543