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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 301077118
Original Database ID ref NP_415638.2
Organism Escherichia coli K-12, Escherichia coli 1303,
etc.
Annotation transcriptional regulator, sir2
family [escherichia coli ms 146-1]
Sequence Length 242

Dataset Information:

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Model Information

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Target Region3-237
Protein Length242
Template PDB Code1s5pA
Template Region40-274
Sequence Identity100%
E-Value0
GA3411
MPQS2.14787
z-DOPE-1.26
TSVMod MethodMTALL
TSVMod RMSD2.782
TSVMod NO350.808
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1s5pstructure and substrate binding properties of cobb, a sir2 homolog protein deacetylase from eschericia coli.
DBALI1s5pA 
JenaImageLibrary1s5p 
Target Sequence
UniProtKBA0A069Z0M2SubName: Full=Sir2 family protein {ECO:0000313|EMBL:KDU52435.1};
InterProA0A069Z0M2 
PFAMA0A069Z0M2 
ProdomA0A069Z0M2 
UniProtKBA0A0E1LW16SubName: Full=Deacetylase of acs and cheY, chemotaxis regulator {ECO:0000313|EMBL:AJF55956.1};
InterProA0A0E1LW16 
PFAMA0A0E1LW16 
ProdomA0A0E1LW16 
UniProtKBD7Y2C3SubName: Full=Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:EFJ98191.1};
InterProD7Y2C3 
PFAMD7Y2C3 
ProdomD7Y2C3 
UniProtKBD7ZPM3SubName: Full=Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:EFK27150.1};
InterProD7ZPM3 
PFAMD7ZPM3 
ProdomD7ZPM3 
UniProtKBE1HJG6SubName: Full=Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:EFK91924.1};
InterProE1HJG6 
PFAME1HJG6 
ProdomE1HJG6 
UniProtKBP75960RecName: Full=NAD-dependent protein deacylase;EC=3.5.1.-;AltName: Full=Regulatory protein SIR2 homolog;
InterProP75960 
PFAMP75960 
ProdomP75960 
UniProtKBV0AI12SubName: Full=Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:ESA96797.1};
InterProV0AI12 
PFAMV0AI12 
ProdomV0AI12 
UniProtKBD7Y2C3SubName: Full=Transcriptional regulator, Sir2 family;
InterProD7Y2C3 
PFAMD7Y2C3 
ProdomD7Y2C3 
UniProtKBE1HJG6SubName: Full=Transcriptional regulator, Sir2 family;
InterProE1HJG6 
PFAME1HJG6 
ProdomE1HJG6 
UniProtKBD7ZPM3SubName: Full=Transcriptional regulator, Sir2 family;
InterProD7ZPM3 
PFAMD7ZPM3 
ProdomD7ZPM3 
UniProtKBA0A7H2C766NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}EC=2.3.1.286 {ECO:0000256|HAMAP-Rule:MF_01121}AltName: Full=Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}
InterProA0A7H2C766 
PFAMA0A7H2C766 
ProdomA0A7H2C766 
UniProtKBP75960RecName: Full=NAD-dependent protein deacylase {ECO:0000255|HAMAP-Rule:MF_01121};EC=3.5.1.- {ECO:0000255|HAMAP-Rule:MF_01121};AltName: Full=Regulatory protein SIR2 homolog {ECO:0000255|HAMAP-Rule:MF_01
InterProP75960 
PFAMP75960 
ProdomP75960 
RefSeqZP_07134524.1 transcriptional regulator, Sir2 family [Escherichia coli MS 115-1]
RefSeqYP_010051180.1CobB-S
RefSeqZP_07143860.1 transcriptional regulator, Sir2 family [Escherichia coli MS 187-1]
RefSeqZP_07244529.1 transcriptional regulator, Sir2 family [Escherichia coli MS 146-1]
GenPept817586853deacetylase of acs and cheY, chemotaxis regulator
GenPept300463657 transcriptional regulator, Sir2 family [Escherichia coli MS 187-1]
GenPept300917891 transcriptional regulator, Sir2 family [Escherichia coli MS 115-1]
GenPept300928325 transcriptional regulator, Sir2 family [Escherichia coli MS 187-1]
GenPept301077118 transcriptional regulator, Sir2 family [Escherichia coli MS 146-1]
GenPept301644536 transcriptional regulator, Sir2 family [Escherichia coli MS 146-1]
GenPept308199517deacetylase of acs and cheY, chemotaxis regulator
GenPept549812623deacetylase of acs and cheY, chemotaxis regulator
GenPept682118657deacetylase of acs and cheY, chemotaxis regulator
GenPept730582324deacetylase of acs and cheY, chemotaxis regulator
GenPept817590994deacetylase of acs and cheY, chemotaxis regulator
GenPept817582712deacetylase of acs and cheY, chemotaxis regulator
GenPept817578573deacetylase of acs and cheY, chemotaxis regulator
GenPept817574431deacetylase of acs and cheY, chemotaxis regulator
GenPept802134667deacetylase of acs and cheY, chemotaxis regulator
GenPept751380129deacetylase of acs and cheY, chemotaxis regulator
GenPept731470053deacetylase of acs and cheY, chemotaxis regulator
GenPept300414881 transcriptional regulator, Sir2 family [Escherichia coli MS 115-1]
GenBankEFK91924.1 transcriptional regulator, Sir2 family [Escherichia coli MS 146-1]
GenBankEFK27150.1 transcriptional regulator, Sir2 family [Escherichia coli MS 187-1]
GenBankEFJ98191.1 transcriptional regulator, Sir2 family [Escherichia coli MS 115-1]