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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P00393
Original Database ID TR DHNA_ECOLI
Organism Escherichia coli
Annotation nadh dehydrogenase (ec 1.6.99.3)
Sequence Length 433

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region5-430
Protein Length433
Template PDB Code1fcdA
Template Region3-400
Sequence Identity15%
E-Value2e-39
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1fcdthe structure of flavocytochrome c sulfide dehydrogenase from a purple phototrophic bacterium chromatium vinosum at 2.5 angstroms resolution ; PFAM: PF00034 ; SCOP: 30593 30594 40218
DBALI1fcdA 
CATH3.50.50.60 Domain: 1fcdA01 FAD/NAD(P)-binding domain (100%)
CATH3.50.50.60 Domain: 1fcdA02 FAD/NAD(P)-binding domain (100%)
CATH3.90.760.10 Domain: 1fcdA03 Flavocytochrome C Sulfide Dehydrogenase, Chain A Domain 3 (99%)
JenaImageLibrary1fcd 
Target Sequence
UniProtKBP00393NADH dehydrogenase (EC 1.6.99.3)
InterProP00393 
PFAMP00393 
ProdomP00393