University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1432164
Original Database ID gi 1432164
Organism Homo sapiens
Annotation lim-kinase1
Sequence Length 647

Dataset Information:

The newest dataset for this sequence was created on 2006-06-16. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region334-607
Protein Length647
Template PDB Code1gjoA
Template Region476-760
Sequence Identity31%
E-Value1e-65
GA3411
Datasetsnp-human2
ModPipe VersionModPipe1.0
Model Date2005-03-28

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1gjothe fgfr2 tyrosine kinase domain ; EC: 2.7.1.112 ; PFAM: PF00069 ; SCOP: 70192
DBALI1gjoA 
CATH3.30.200.20 Domain: 1gjoA01 Phosphorylase Kinase; domain 1 (92%)
CATH1.10.510.10 Domain: 1gjoA02 Transferase(Phosphotransferase) domain 1 (99%)
JenaImageLibrary1gjo 
Target Sequence
UniProtKBP53667LIM domain kinase 1 (EC 2.7.1.37) (LIMK-1)
InterProP53667 
PFAMP53667 
ProdomP53667 
GenPept1432164LIM-kinase1
GenPept1657755LIM-kinase
GenPept3915762LIK1_HUMAN LIM DOMAIN KINASE 1 (LIMK-1)
GenBankAAB17545.1 LIM-kinase1 [Homo sapiens]
GenBankAAC13885.1 LIM-kinase [Homo sapiens]
UCSCGenomeBrowserP53667