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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 3702284
Original Database ID gi 3702284
Organism Homo sapiens
Annotation ptpsigma
Sequence Length 1399

Dataset Information:

The newest dataset for this sequence was created on 2007-03-20. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region417-607
Protein Length1399
Template PDB Code1bquA
Template Region18-212
Sequence Identity15%
E-Value6e-10
GA3410.14
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1bqucytokyne-binding region of gp130 ; PFAM: PF00041 ; SCOP: 22066 22067
DBALI1bquA 
CATH2.60.40.10 Domain: 1bquA01 Immunoglobulins (87%)
CATH2.60.40.10 Domain: 1bquA02 Immunoglobulins (98%)
JenaImageLibrary1bqu 
Target Sequence
UniProtKBO75870PTPsigma (Fragment)
InterProO75870 
PFAMO75870 
ProdomO75870 
GenPept3702284PTPsigma
GenBankAAC62834.1 PTPsigma [AA 524- 1926] [Homo sapiens]
ENSEMBLENSP00000262963Receptor-type tyrosine-protein phosphatase S precursor (EC 3.1.3.48) (R-PTP-S) (Protein-tyrosine phosphatase sigma) (R-PTP-sigma). [Homo sapiens]
ENSEMBLENSP00000262963 
ENSEMBLENSP00000262963TDI sequence
IPIIPI00472382.1