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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1109792
Original Database ID gi 1109792
Organism Homo sapiens
Annotation protein tyrosine phosphatase sigma
Sequence Length 1948

Dataset Information:

The newest dataset for this sequence was created on 2007-03-20. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1452-1647
Protein Length1948
Template PDB Code1rxdA
Template Region9-154
Sequence Identity17%
E-Value3e-23
GA3410.2
Datasetnysgxrc_1rxd_307
ModPipe VersionModPipe1.0
Model Date2007-03-20

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1rxdcrystal structure of human protein tyrosine phosphatase 4a1
DBALI1rxdA 
CATH3.90.190.10 Domain: 1rxdA00 Protein tyrosine phosphatase superfamily (96%)
JenaImageLibrary1rxd 
Target Sequence
UniProtKBQ13332Receptor-type protein-tyrosine phosphatase S precursor (EC 3.1.3.48)DE (R-PTP-S) (Protein-tyrosine phosphatase sigma) (R-PTP-sigma)
InterProQ13332 
PFAMQ13332 
ProdomQ13332 
2204414A2204414A protein Tyr phosphatase
GenPept1109792protein tyrosine phosphatase sigma
GenPept15868492204414A protein Tyr phosphatase
GenPept4506327 protein tyrosine phosphatase, receptor type, sigma [Homo sapiens]
GenBankAAC50299.1 protein tyrosine phosphatase sigma [Homo sapiens]
UCSCGenomeBrowserQ13332