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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 3355458
Original Database ID TR O75255
Organism Homo sapiens
Annotation ptpsigma, partial cds, partial
Sequence Length 475

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region8-369
Protein Length475
Template PDB Code1cs6A
Template Region13-376
Sequence Identity14%
E-Value2e-12
GA3410.05
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1cs6n-terminal fragment of axonin-1 from chicken ; PFAM: PF00047 ; SCOP: 21760 21761 21762 21763
DBALI1cs6A 
CATH2.60.40.10 Domain: 1cs6A01 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 1cs6A02 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 1cs6A03 Immunoglobulins (94%)
CATH2.60.40.10 Domain: 1cs6A04 Immunoglobulins (87%)
JenaImageLibrary1cs6 
Target Sequence
UniProtKBO75255PTPsigma, partial CDS (Fragment)
InterProO75255 
PFAMO75255 
ProdomO75255 
GenPept3355458PTPsigma, partial CDS, partial
GenBankAAC27825.1 PTPsigma, partial CDS [Homo sapiens]