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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A090JIQ8
Original Database ID gi 90111260
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation subname: full=outer membrane lom
domain protein {eco:0000313|embl:cee10457.1};
Sequence Length 56

Dataset Information:

The newest dataset for this sequence was created on 2006-10-17. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region6-56
Protein Length56
Template PDB Code1qj8A
Template Region98-148
Sequence Identity39%
E-Value 1e-10
GA3410.03
MPQS1.29
z-DOPE0.04
DatasetE.coli_1
ModPipe VersionModPipe2.0
Model Date2006-10-17

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1qj8crystal structure of the outer membrane protein ompx from escherichia coli ; SCOP: 43744
DBALI1qj8A 
CATH2.40.160.20 Domain: 1qj8A00 Porin (34%)
JenaImageLibrary1qj8 
Target Sequence
UniProtKBE6P600SubName: Full=Ail/Lom family protein;
InterProE6P600 
PFAME6P600 
ProdomE6P600 
UniProtKBI0ZR13SubName: Full=Outer membrane protein Lom;
InterProI0ZR13 
PFAMI0ZR13 
ProdomI0ZR13 
UniProtKBG2FAC4SubName: Full=Ail/Lom family protein;
InterProG2FAC4 
PFAMG2FAC4 
ProdomG2FAC4 
UniProtKBA0A090JIQ8SubName: Full=Outer membrane lom domain protein {ECO:0000313|EMBL:CEE10457.1};
InterProA0A090JIQ8 
PFAMA0A090JIQ8 
ProdomA0A090JIQ8 
UniProtKBI0ZR13SubName: Full=Outer membrane protein Lom;
InterProI0ZR13 
PFAMI0ZR13 
ProdomI0ZR13 
UniProtKBG2FAC4SubName: Full=Ail/Lom family protein;
InterProG2FAC4 
PFAMG2FAC4 
ProdomG2FAC4 
UniProtKBE6P600SubName: Full=Ail/Lom family protein;
InterProE6P600 
PFAME6P600 
ProdomE6P600 
UniProtKBP77184Rac prophage; predicted protein, C-ter (Pseudogene)
InterProP77184 
PFAMP77184 
ProdomP77184 
GenPept932859290Attachment invasion locus protein precursor
GenPept87081891Rac prophage; predicted protein, C-ter fragment (pseudogene)
GenPept687676525Rac prophage; predicted protein, C-ter fragment
GenPept687672247Rac prophage; predicted protein, C-ter fragment
GenPept315136012Ail/Lom family protein