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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P77184.3
Original Database ID UP P77184
Organism Escherichia coli, Escherichia coli K-12
Annotation lomr_ecoli recname: full=putative
protein lomr
Sequence Length 164

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region23-164
Protein Length164
Template PDB Code1p4tA
Template Region7-155
Sequence Identity16%
E-Value0
GA3410.04
MPQS0.912354
z-DOPE0.28
TSVMod MethodMTALL
TSVMod RMSD8.813
TSVMod NO350.454
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1p4tcrystal structure of neisserial surface protein a (nspa) ; PFAM: PF02462
DBALI1p4tA 
CATH2.40.160.20 Domain: 1p4tA00 Porin (96%)
JenaImageLibrary1p4t 
Target Sequence
UniProtKBP77184RecName: Full=Putative protein LomR;
InterProP77184 
PFAMP77184 
ProdomP77184 
UniProtKBP77184RecName: Full=Putative protein LomR;
InterProP77184 
PFAMP77184 
ProdomP77184 
UniProtKBP77184.3LOMR_ECOLI RecName: Full=Putative protein lomR
InterProP77184.3 
PFAMP77184.3 
ProdomP77184.3 
GenPept122064293LOMR_ECOLI RecName: Full=Putative protein LomR