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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link D3DRX9
Original Database ID sp P05556
Organism Gorilla gorilla gorilla, Homo sapiens, etc.
Annotation recname: full=integrin beta;
Sequence Length 798

Dataset Information:

The newest dataset for this sequence was created on 2021-02-27. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region27-726
Protein Length798
Template PDB Code4nehB
Template Region3-676
Sequence Identity47%
E-Value0
GA3411
MPQS1.38129
z-DOPE-0.05
TSVMod MethodMSRED
TSVMod RMSD3.895
TSVMod NO350.703
DatasetMW-LMQC_D2
ModPipe VersionSVN.r1703
Model Date2021-02-27

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4neh
DBALI4nehB 
JenaImageLibrary4neh 
Target Sequence
UniProtKBG3QTG8RecName: Full=Integrin beta {ECO:0000256|RuleBase:RU000633};
InterProG3QTG8 
PFAMG3QTG8 
ProdomG3QTG8 
UniProtKBQ8WUM6RecName: Full=Integrin beta-1;AltName: Full=Fibronectin receptor subunit beta;AltName: Full=VLA-4 subunit beta;AltName: CD_antigen=CD29;Flags: Precursor;
InterProQ8WUM6 
PFAMQ8WUM6 
ProdomQ8WUM6 
UniProtKBD3DRX9RecName: Full=Integrin beta;
InterProD3DRX9 
PFAMD3DRX9 
ProdomD3DRX9 
UniProtKBQ8WUM6RecName: Full=Integrin, beta 1 (Fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (Integrin, beta 1 (Fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
InterProQ8WUM6 
PFAMQ8WUM6 
ProdomQ8WUM6 
UniProtKBG3QTG8RecName: Full=Integrin beta;
InterProG3QTG8 
PFAMG3QTG8 
ProdomG3QTG8 
UniProtKBQ14647RecName: Full=Integrin beta-1;AltName: Full=Fibronectin receptor subunit beta;AltName: Full=VLA-4 subunit beta;AltName: CD_antigen=CD29;Flags: Precursor;
InterProQ14647 
PFAMQ14647 
ProdomQ14647 
UniProtKBQ8WUM6RecName: Full=Integrin beta-1;AltName: Full=Fibronectin receptor subunit beta;AltName: Full=Glycoprotein IIa;Short=GPIIA;AltName: Full=VLA-4 subunit beta;AltName: CD_antigen=CD29;Flags: Precursor;
InterProQ8WUM6 
PFAMQ8WUM6 
ProdomQ8WUM6 
UniProtKBQ29RW2RecName: Full=Integrin beta-1;AltName: Full=Fibronectin receptor subunit beta;AltName: Full=VLA-4 subunit beta;AltName: CD_antigen=CD29;Flags: Precursor;
InterProQ29RW2 
PFAMQ29RW2 
ProdomQ29RW2 
UniProtKBQ7Z3V1RecName: Full=Integrin beta-1;AltName: Full=Fibronectin receptor subunit beta;AltName: Full=VLA-4 subunit beta;AltName: CD_antigen=CD29;Flags: Precursor;
InterProQ7Z3V1 
PFAMQ7Z3V1 
ProdomQ7Z3V1 
UniProtKBQ14622RecName: Full=Integrin beta-1;AltName: Full=Fibronectin receptor subunit beta;AltName: Full=VLA-4 subunit beta;AltName: CD_antigen=CD29;Flags: Precursor;
InterProQ14622 
PFAMQ14622 
ProdomQ14622 
UniProtKBQ13212Integrin beta-1AltName: Full=Fibronectin receptor subunit betaAltName: Full=Glycoprotein IIaShort=GPIIAAltName: Full=VLA-4 subunit betaAltName: CD_antigen=CD29Flags: Precursor
InterProQ13212 
PFAMQ13212 
ProdomQ13212 
UniProtKBQ13089Integrin beta-1 {ECO:0000305}AltName: Full=Fibronectin receptor subunit betaAltName: Full=Glycoprotein IIaShort=GPIIAAltName: Full=VLA-4 subunit betaAltName: CD_antigen=CD29Flags: Precursor
InterProQ13089 
PFAMQ13089 
ProdomQ13089 
UniProtKBQ13091Integrin beta-1AltName: Full=Fibronectin receptor subunit betaAltName: Full=Glycoprotein IIaShort=GPIIAAltName: Full=VLA-4 subunit betaAltName: CD_antigen=CD29Flags: Precursor
InterProQ13091 
PFAMQ13091 
ProdomQ13091 
UniProtKBQ13090Integrin beta-1AltName: Full=Fibronectin receptor subunit betaAltName: Full=Glycoprotein IIaShort=GPIIAAltName: Full=VLA-4 subunit betaAltName: CD_antigen=CD29Flags: Precursor
InterProQ13090 
PFAMQ13090 
ProdomQ13090 
UniProtKBP78467Integrin beta-1 {ECO:0000305}AltName: Full=Fibronectin receptor subunit betaAltName: Full=Glycoprotein IIaShort=GPIIAAltName: Full=VLA-4 subunit betaAltName: CD_antigen=CD29Flags: Precursor
InterProP78467 
PFAMP78467 
ProdomP78467 
UniProtKBP78466Integrin beta-1 {ECO:0000305}AltName: Full=Fibronectin receptor subunit betaAltName: Full=Glycoprotein IIaShort=GPIIAAltName: Full=VLA-4 subunit betaAltName: CD_antigen=CD29Flags: Precursor
InterProP78466 
PFAMP78466 
ProdomP78466 
UniProtKBP05556.2ITB1_HUMAN RecName: Full=Integrin beta-1; AltName: Full=Fibronectin receptor subunit beta; AltName: Full=VLA-4 subunit beta; AltName: CD_antigen=CD29; Flags: Precursor
InterProP05556.2 
PFAMP05556.2 
ProdomP05556.2 
UniProtKBP05556Integrin beta-1 {ECO:0000305}AltName: Full=Fibronectin receptor subunit betaAltName: Full=Glycoprotein IIaShort=GPIIAAltName: Full=VLA-4 subunit betaAltName: CD_antigen=CD29Flags: Precursor
InterProP05556 
PFAMP05556 
ProdomP05556 
RefSeqXP_030871348.1integrin beta-1
RefSeqNP_596867.1 integrin beta-1 isoform 1A precursor [Homo sapiens]
RefSeqNP_002202.2 integrin beta-1 isoform 1A precursor [Homo sapiens]
GenPept389925764Sequence 427 from patent US 8168586
GenPept414899645Sequence 10 from patent US 8298531
GenPept544076526Sequence 11 from patent US 8524238
GenPept544076527Sequence 12 from patent US 8524238
GenPept544076528Sequence 13 from patent US 8524238
GenPept344967214Sequence 20 from patent US 7998689
GenPept389925362Sequence 25 from patent US 8168586
GenPept389925361Sequence 24 from patent US 8168586
GenPept389925359Sequence 22 from patent US 8168586
GenPept389925350Sequence 13 from patent US 8168586
GenPept389925349Sequence 12 from patent US 8168586
GenPept389925348Sequence 11 from patent US 8168586
GenPept363841396Sequence 59 from patent US 8071652
GenPept544076537Sequence 22 from patent US 8524238
GenPept544076539Sequence 24 from patent US 8524238
GenPept915813503Sequence 273 from patent US 9005963
GenPept915757819Sequence 1650 from patent US 9002652
GenPept757922821Sequence 1650 from patent US 8603752
GenPept756949576Sequence 9 from patent US 8865413
GenPept756615267Sequence 10 from patent US 8759009
GenPept756521843Sequence 241 from patent US 8741556
GenPept756333231Sequence 2 from patent US 8685921
GenPept568528390Sequence 4350 from patent US 8586006
GenPept568528385Sequence 4345 from patent US 8586006
GenPept55959574integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
GenPept544076942Sequence 427 from patent US 8524238
GenPept544076540Sequence 25 from patent US 8524238
GenPept208967883integrin, beta 1, partial
GenPept119606354integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12), isoform CRA_a
GenPept223605102Sequence 9 from patent US 7473531
GenPept239641374Sequence 191 from patent US 7521195
GenPept239641382Sequence 199 from patent US 7521195
GenPept239641386Sequence 203 from patent US 7521195
GenPept239641387Sequence 204 from patent US 7521195
GenPept239641390Sequence 207 from patent US 7521195
GenPept239641391Sequence 208 from patent US 7521195
GenPept281035849Sequence 6 from patent US 7608413
GenPept281035850Sequence 7 from patent US 7608413
GenPept281035851Sequence 8 from patent US 7608413
GenPept218563324ITB1_HUMAN RecName: Full=Integrin beta-1; AltName: Full=Fibronectin receptor subunit beta; AltName: Full=VLA-4 subunit beta; AltName: CD_antigen=CD29; Flags: Precursor
GenPept19743823 integrin beta-1 isoform 1A precursor [Homo sapiens]
GenPept119606359integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12), isoform CRA_a
GenPept119606360integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12), isoform CRA_a
GenPept119606361integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12), isoform CRA_a
GenPept119606364integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12), isoform CRA_a
GenPept123980332integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
GenPept123995151integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12), partial
GenPept155703346Sequence 9329 from patent US 7235358
GenPept17454488 (XM_058357) integrin beta 1 [Homo sapiens]
GenPept18042960Integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
GenPept19743813 integrin beta-1 isoform 1A precursor [Homo sapiens]
GenPept281035860Sequence 17 from patent US 7608413
GenPept281035862Sequence 19 from patent US 7608413
GenPept331467438Sequence 12446 from patent US 7892745
GenPept336158073Sequence 504 from patent US 7960100
GenPept336158074Sequence 505 from patent US 7960100
GenPept336158075Sequence 506 from patent US 7960100
GenPept336158086Sequence 517 from patent US 7960100
GenPept336158088Sequence 519 from patent US 7960100
GenPept336158089Sequence 520 from patent US 7960100
GenPept344967200Sequence 6 from patent US 7998689
GenPept344967201Sequence 7 from patent US 7998689
GenPept344967202Sequence 8 from patent US 7998689
GenPept344967211Sequence 17 from patent US 7998689
GenPept344967213Sequence 19 from patent US 7998689
GenPept331427609Sequence 1650 from patent US 7883858
GenPept331402328Sequence 12446 from patent US 7879556
GenPept281035863Sequence 20 from patent US 7608413
GenPept314536302Sequence 233 from patent US 7807392
GenPept314543949Sequence 10 from patent US 7807794
GenPept314874844Sequence 147 from patent US 7842466
GenPept314874851Sequence 154 from patent US 7842466
GenPept314874855Sequence 158 from patent US 7842466
GenPept314874856Sequence 159 from patent US 7842466
GenPept314874859Sequence 162 from patent US 7842466
GenPept314874860Sequence 163 from patent US 7842466
GenBankEAW85954.1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12), isoform CRA_a [Homo sapiens]
GenBankEAW85955.1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12), isoform CRA_a [Homo sapiens]
GenBankEAW85958.1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12), isoform CRA_a [Homo sapiens]
ENSEMBLENSP00000303351 
ENSEMBLENSP00000339970 
ENSEMBLENSP00000339970TDI sequence
ENSEMBLENSP00000303351