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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q46798
Original Database ID tr C1ND68
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation uug start
Sequence Length 259

Dataset Information:

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Model Information

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Target Region47-248
Protein Length259
Template PDB Code1q90A
Template Region72-251
Sequence Identity23%
E-Value1.2
GA3410.27
Datasetcsmp_1q90_907
ModPipe VersionModPipe1.0
Model Date2007-09-24

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1q90structure of the cytochrome b6f (plastohydroquinone : plastocyanin oxidoreductase) from chlamydomonas reinhardtii
DBALI1q90A 
CATH2.60.40.830 Domain: 1q90A01 Immunoglobulin-like (100%)
CATH2.40.50.100 Domain: 1q90A02 OB fold (Dihydrolipoamide Acetyltransferase, E2P) (100%)
JenaImageLibrary1q90 
Target Sequence
UniProtKBJ7RUQ1SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:CCK48151.1};
InterProJ7RUQ1 
PFAMJ7RUQ1 
ProdomJ7RUQ1 
UniProtKBJ7QH75SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:CCJ45465.1};
InterProJ7QH75 
PFAMJ7QH75 
ProdomJ7QH75 
UniProtKBC1ND68SubName: Full=Peptidase;
InterProC1ND68 
PFAMC1ND68 
ProdomC1ND68 
UniProtKBQ46798UUG START
InterProQ46798 
PFAMQ46798 
ProdomQ46798 
UniProtKBC1ND68SubName: Full=Peptidase;
InterProC1ND68 
PFAMC1ND68 
ProdomC1ND68 
RefSeqZP_04871966.1 peptidase [Escherichia sp. 1_1_43]
GenPept16130767 (NC_000913) putative lipoprotein [Escherichia coli K12]
GenPept887815UUG start
GenPept7448010A65070 hypothetical protein b2865 - Escherichia coli (strain K-12)
GenPept412970813putative lipoprotein
GenPept412964223putative lipoprotein
GenPept254037908 peptidase [Escherichia sp. 1_1_43]
GenPept226839532peptidase
GenPept1789228putative lipoprotein; putative lipoprotein, outer membrane
GenBankEEH71553.1 peptidase [Escherichia sp. 1_1_43]
GenBankAAA83046.1 UUG start [Escherichia coli]