University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1293533
Original Database ID gi 1293533
Organism Escherichia coli, Escherichia coli K-12
Annotation the translation start site has
been verified
Sequence Length 276

Dataset Information:

The newest dataset for this sequence was created on 2007-11-29. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region92-273
Protein Length276
Template PDB Code2irvA
Template Region92-273
Sequence Identity88%
E-Value4e-23
GA3411
Datasetcsmp_2irv_1007
ModPipe VersionModPipe1.0
Model Date2007-11-02

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2irvcrystal structure of glpg, a rhomboid intramembrane serine protease
DBALI2irvA 
CATH1.20.1540.10 Domain: 2irvA00 Rhomboid-like domains (100%)
JenaImageLibrary2irv 
Target Sequence
UniProtKBP09391Protein glpG
InterProP09391 
PFAMP09391 
ProdomP09391 
GenPept1293533the translation start site has been verified
GenPept16131298 (NC_000913) protein of glp regulon [Escherichia coli K12]
GenPept2367225protein of glp regulon
GenPept7429008BVECGG glpG protein - Escherichia coli
GenBankAAC28166.1 the translation start site has been verified [Escherichia coli]