University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A2UIH1
Original Database ID
Organism Escherichia coli, Escherichia coli B, etc.
Annotation xanthine/uracil/vitamin c permease.
Sequence Length 470

Dataset Information:

Only Template based calculation have been performed for this sequence. Template based calculations don't use all available PDB structures. To ensure that the most optimal template is used for this sequence, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region122-158
Protein Length470
Template PDB Code1yoxD
Template Region115-151
Sequence Identity27%
E-Value0
GA3410.03
MPQS-0.0769766
z-DOPE4.05
Datasetcsmp_9-09
ModPipe VersionSVNx.x
Model Date2009-10-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1yoxx-ray structure of the conserved hypothetical protein pa3696 from pseudomonas aeruginosa
DBALI1yoxD 
JenaImageLibrary1yox 
Target Sequence
UniProtKBG0F4K2SubName: Full=Inner membrane protein yicO {ECO:0000313|EMBL:AEJ59075.1};
InterProG0F4K2 
PFAMG0F4K2 
ProdomG0F4K2 
UniProtKBA0A079F6V8SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KDY52693.1};
InterProA0A079F6V8 
PFAMA0A079F6V8 
ProdomA0A079F6V8 
UniProtKBA0A079CXJ6SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KDY14186.1};
InterProA0A079CXJ6 
PFAMA0A079CXJ6 
ProdomA0A079CXJ6 
UniProtKBA0A074I2T8SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KEN94466.1};
InterProA0A074I2T8 
PFAMA0A074I2T8 
ProdomA0A074I2T8 
UniProtKBA0A073GLD0SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KEJ65565.1};
InterProA0A073GLD0 
PFAMA0A073GLD0 
ProdomA0A073GLD0 
UniProtKBA0A071DE81SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KDZ39734.1};
InterProA0A071DE81 
PFAMA0A071DE81 
ProdomA0A071DE81 
UniProtKBA0A071CJM9SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KDZ19126.1};
InterProA0A071CJM9 
PFAMA0A071CJM9 
ProdomA0A071CJM9 
UniProtKBA0A071C2Y2SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KDY90676.1};
InterProA0A071C2Y2 
PFAMA0A071C2Y2 
ProdomA0A071C2Y2 
UniProtKBA0A071AJL5SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KDY61176.1};
InterProA0A071AJL5 
PFAMA0A071AJL5 
ProdomA0A071AJL5 
UniProtKBA0A070Y1Q8SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KDX85507.1};
InterProA0A070Y1Q8 
PFAMA0A070Y1Q8 
ProdomA0A070Y1Q8 
UniProtKBA0A079FWM4SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KDY63550.1};
InterProA0A079FWM4 
PFAMA0A079FWM4 
ProdomA0A079FWM4 
UniProtKBA0A079HAC3SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KDY98114.1};
InterProA0A079HAC3 
PFAMA0A079HAC3 
ProdomA0A079HAC3 
UniProtKBA0A080GQR4SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KEN86365.1};
InterProA0A080GQR4 
PFAMA0A080GQR4 
ProdomA0A080GQR4 
UniProtKBE6B165SubName: Full=Inner membrane protein yicO {ECO:0000313|EMBL:EFU99217.1};
InterProE6B165 
PFAME6B165 
ProdomE6B165 
UniProtKBG2B1L6SubName: Full=Inner membrane protein yicO;
InterProG2B1L6 
PFAMG2B1L6 
ProdomG2B1L6 
UniProtKBF4TKT7SubName: Full=Xanthine/uracil permeases family protein {ECO:0000313|EMBL:EGI19413.1};
InterProF4TKT7 
PFAMF4TKT7 
ProdomF4TKT7 
UniProtKBG2BFK5SubName: Full=Inner membrane protein yicO;
InterProG2BFK5 
PFAMG2BFK5 
ProdomG2BFK5 
UniProtKBG2CRT3SubName: Full=Inner membrane protein yicO;
InterProG2CRT3 
PFAMG2CRT3 
ProdomG2CRT3 
UniProtKBH4WHB2SubName: Full=Permease family protein;
InterProH4WHB2 
PFAMH4WHB2 
ProdomH4WHB2 
UniProtKBA0A0H3XEH8SubName: Full=Inorganic anion transporter, sulfate permease (SulP) family {ECO:0000313|EMBL:AKM37251.1};
InterProA0A0H3XEH8 
PFAMA0A0H3XEH8 
ProdomA0A0H3XEH8 
UniProtKBA0A094XNT2SubName: Full=Adenine permease PurP {ECO:0000313|EMBL:KHI95195.1};SubName: Full=Inner membrane protein yjcD {ECO:0000313|EMBL:KGM85712.1};SubName: Full=Inorganic anion transporter {ECO:0000313|EMBL:KG
InterProA0A094XNT2 
PFAMA0A094XNT2 
ProdomA0A094XNT2 
UniProtKBA0A080HWN7SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KEO21311.1};
InterProA0A080HWN7 
PFAMA0A080HWN7 
ProdomA0A080HWN7 
UniProtKBA0A070SXF9SubName: Full=Putative permease yicO {ECO:0000313|EMBL:KDX21449.1};
InterProA0A070SXF9 
PFAMA0A070SXF9 
ProdomA0A070SXF9 
UniProtKBK5GN98SubName: Full=Putative permease yicO;
InterProK5GN98 
PFAMK5GN98 
ProdomK5GN98 
UniProtKBA8A6C7SubName: Full=Inorganic anion transporter, sulfate permease (SulP) family;
InterProA8A6C7 
PFAMA8A6C7 
ProdomA8A6C7 
UniProtKBK5GK99SubName: Full=Uncharacterized protein;
InterProK5GK99 
PFAMK5GK99 
ProdomK5GK99 
UniProtKBN2Y1X6SubName: Full=Putative permease yicO;
InterProN2Y1X6 
PFAMN2Y1X6 
ProdomN2Y1X6 
UniProtKBL8C385SubName: Full=Xanthine/uracil/thiamine/ascorbate permease family protein;
InterProL8C385 
PFAML8C385 
ProdomL8C385 
UniProtKBM8YMZ9SubName: Full=Putative permease yicO;
InterProM8YMZ9 
PFAMM8YMZ9 
ProdomM8YMZ9 
UniProtKBM9DH13SubName: Full=Putative permease yicO {ECO:0000313|EMBL:EMW91979.1};
InterProM9DH13 
PFAMM9DH13 
ProdomM9DH13 
UniProtKBN2WIG6SubName: Full=Putative permease yicO;
InterProN2WIG6 
PFAMN2WIG6 
ProdomN2WIG6 
UniProtKBN2ENU3SubName: Full=Putative permease yicO;
InterProN2ENU3 
PFAMN2ENU3 
ProdomN2ENU3 
UniProtKBN2KGQ3SubName: Full=Putative permease yicO;
InterProN2KGQ3 
PFAMN2KGQ3 
ProdomN2KGQ3 
UniProtKBK3ICB0SubName: Full=Xanthine/uracil permeases family protein;
InterProK3ICB0 
PFAMK3ICB0 
ProdomK3ICB0 
UniProtKBK3GTU1SubName: Full=Xanthine/uracil permeases family protein;
InterProK3GTU1 
PFAMK3GTU1 
ProdomK3GTU1 
UniProtKBI0ZY57SubName: Full=Xanthine/uracil permeases family protein;
InterProI0ZY57 
PFAMI0ZY57 
ProdomI0ZY57 
UniProtKBI2X6J1SubName: Full=Permease family protein {ECO:0000313|EMBL:EII44611.1};
InterProI2X6J1 
PFAMI2X6J1 
ProdomI2X6J1 
UniProtKBW1BJX1SubName: Full=Xanthine/uracil/thiamine/ascorbate permease family protein {ECO:0000313|EMBL:CDK80946.1};
InterProW1BJX1 
PFAMW1BJX1 
ProdomW1BJX1 
UniProtKBI2Y5H1SubName: Full=Permease family protein;
InterProI2Y5H1 
PFAMI2Y5H1 
ProdomI2Y5H1 
UniProtKBN1SF52SubName: Full=Putative permease yicO;
InterProN1SF52 
PFAMN1SF52 
ProdomN1SF52 
UniProtKBI2YG10SubName: Full=Permease family protein;
InterProI2YG10 
PFAMI2YG10 
ProdomI2YG10 
UniProtKBI2ZKU9SubName: Full=Permease family protein;
InterProI2ZKU9 
PFAMI2ZKU9 
ProdomI2ZKU9 
UniProtKBN2I0S8SubName: Full=Putative permease yicO;
InterProN2I0S8 
PFAMN2I0S8 
ProdomN2I0S8 
UniProtKBG2B1L6SubName: Full=Inner membrane protein yicO;
InterProG2B1L6 
PFAMG2B1L6 
ProdomG2B1L6 
UniProtKBG0F4K2SubName: Full=Inner membrane protein yicO;
InterProG0F4K2 
PFAMG0F4K2 
ProdomG0F4K2 
UniProtKBG2CRT3SubName: Full=Inner membrane protein yicO;
InterProG2CRT3 
PFAMG2CRT3 
ProdomG2CRT3 
UniProtKBH4WHB2SubName: Full=Permease family protein;
InterProH4WHB2 
PFAMH4WHB2 
ProdomH4WHB2 
UniProtKBI0ZY57SubName: Full=Xanthine/uracil permeases family protein;
InterProI0ZY57 
PFAMI0ZY57 
ProdomI0ZY57 
UniProtKBI2ZKU9SubName: Full=Permease family protein;
InterProI2ZKU9 
PFAMI2ZKU9 
ProdomI2ZKU9 
UniProtKBI2Y5H1SubName: Full=Permease family protein;
InterProI2Y5H1 
PFAMI2Y5H1 
ProdomI2Y5H1 
UniProtKBI2X6J1SubName: Full=Permease family protein;
InterProI2X6J1 
PFAMI2X6J1 
ProdomI2X6J1 
UniProtKBG2BFK5SubName: Full=Inner membrane protein yicO;
InterProG2BFK5 
PFAMG2BFK5 
ProdomG2BFK5 
UniProtKBF4TKT7SubName: Full=Xanthine/uracil permeases family protein;
InterProF4TKT7 
PFAMF4TKT7 
ProdomF4TKT7 
UniProtKBA0A1X3JAB4SubName: Full=Xanthine/uracil permeases family protein {ECO:0000313|EMBL:OSL02196.1}
InterProA0A1X3JAB4 
PFAMA0A1X3JAB4 
ProdomA0A1X3JAB4 
UniProtKBA0A7I6H3X4SubName: Full=Inorganic anion transporter, sulfate permease (SulP) family {ECO:0000313|EMBL:ABV08081.1}
InterProA0A7I6H3X4 
PFAMA0A7I6H3X4 
ProdomA0A7I6H3X4 
UniProtKBA0A828R9Y6SubName: Full=Inner membrane protein yicO {ECO:0000313|EMBL:EFU99217.1}
InterProA0A828R9Y6 
PFAMA0A828R9Y6 
ProdomA0A828R9Y6 
UniProtKBA2UIH1Xanthine/uracil/vitamin C permease.
InterProA2UIH1 
PFAMA2UIH1 
ProdomA2UIH1 
UniProtKBA8A6C7SubName: Full=Inorganic anion transporter, sulfate permease (SulP) family;
InterProA8A6C7 
PFAMA8A6C7 
ProdomA8A6C7 
UniProtKBI2YG10SubName: Full=Permease family protein;
InterProI2YG10 
PFAMI2YG10 
ProdomI2YG10 
UniProtKBE6B165SubName: Full=Inner membrane protein yicO;
InterProE6B165 
PFAME6B165 
ProdomE6B165 
UniProtKBQ2M7X7Inner membrane protein yicO
InterProQ2M7X7 
PFAMQ2M7X7 
ProdomQ2M7X7 
UniProtKBP76726Inner membrane protein yicO
InterProP76726 
PFAMP76726 
ProdomP76726 
UniProtKBP31440Inner membrane protein yicO
InterProP31440 
PFAMP31440 
ProdomP31440 
RefSeqYP_001460464.1 sulfate permease family inorganic anion transporter [Escherichia coli HS]
RefSeqZP_01700161.1 Xanthine/uracil/vitamin C permease [Escherichia coli B]
GenPept899724548adenine permease PurP
GenPept2506720YICO_ECOLI HYPOTHETICAL 49.9 KDA PROTEIN IN NLPA-UHPT INTERGENIC REGION
GenPept7446802A65168 hypothetical 49.9 kD protein in nlpa-uhpt intergenic region - Escherichia coli (strain K-12)
GenPept1790097orf, hypothetical protein; putative membrane protein
GenPept16131534 (NC_000913) orf, hypothetical protein [Escherichia coli K12]
GenPept157163146 sulfate permease family inorganic anion transporter [Escherichia coli HS]
GenPept157068826inorganic anion transporter, sulfate permease (SulP) family
GenPept124529015 Xanthine/uracil/vitamin C permease [Escherichia coli B]
GenPept899733390adenine permease PurP
GenPept932861774Xanthine/uracil/thiamine/ascorbate permease family protein
GenPept124500154 Xanthine/uracil/vitamin C permease [Escherichia coli B]
GenPept331047335xanthine/uracil permeases family protein
GenPept443760692Sequence 12989 from patent US 8343764
GenPept808736931adenine permease PurP
GenPept808732494adenine permease PurP
GenPept808724178adenine permease PurP
GenPept808719808adenine permease PurP
GenPept808715396adenine permease PurP
GenPept899728902adenine permease PurP
GenPept808706675adenine permease PurP
GenPept808702302adenine permease PurP
GenPept742953018adenine permease PurP
GenPept732686729adenine permease PurP
GenPept808711027adenine permease PurP
GenBankABV08081.1 inorganic anion transporter, sulfate permease (SulP) family [Escherichia coli HS]
GenBankEAY47631.1 Xanthine/uracil/vitamin C permease [Escherichia coli B]