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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link C5A142
Original Database ID UP P32695
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation recname: full=trna-dihydrouridine
synthase;ec=1.-.-.-;
Sequence Length 330

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region12-327
Protein Length330
Template PDB Code1vhnA
Template Region6-309
Sequence Identity20%
E-Value0
GA3411
MPQS1.11978
z-DOPE-0.3
TSVMod MethodMSALL
TSVMod RMSD4.653
TSVMod NO350.702
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1vhncrystal structure of a putative flavin oxidoreductase with flavin
DBALI1vhnA 
CATH3.20.20.70 Domain: 1vhnA01 Aldolase class I (100%)
CATH1.10.1200.80 Domain: 1vhnA02 Putative flavin oxidoreducatase; domain 2 (100%)
JenaImageLibrary1vhn 
Target Sequence
UniProtKBA0A071AHR9RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A071AHR9 
PFAMA0A071AHR9 
ProdomA0A071AHR9 
UniProtKBC5A142RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProC5A142 
PFAMC5A142 
ProdomC5A142 
UniProtKBN3UAN0RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3UAN0 
PFAMN3UAN0 
ProdomN3UAN0 
UniProtKBD3GT29RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.-.-.- {ECO:0000313|EMBL:CBG37241.1};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProD3GT29 
PFAMD3GT29 
ProdomD3GT29 
UniProtKBD6I3T7RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProD6I3T7 
PFAMD6I3T7 
ProdomD6I3T7 
UniProtKBD6IIM2RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProD6IIM2 
PFAMD6IIM2 
ProdomD6IIM2 
UniProtKBD6J532RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProD6J532 
PFAMD6J532 
ProdomD6J532 
UniProtKBD7JI59RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProD7JI59 
PFAMD7JI59 
ProdomD7JI59 
UniProtKBN3VRU7RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3VRU7 
PFAMN3VRU7 
ProdomN3VRU7 
UniProtKBN3WWY2RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3WWY2 
PFAMN3WWY2 
ProdomN3WWY2 
UniProtKBN4CD22RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN4CD22 
PFAMN4CD22 
ProdomN4CD22 
UniProtKBN3UCL0RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3UCL0 
PFAMN3UCL0 
ProdomN3UCL0 
UniProtKBA0A071BZQ3RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A071BZQ3 
PFAMA0A071BZQ3 
ProdomA0A071BZQ3 
UniProtKBA0A071CK10RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A071CK10 
PFAMA0A071CK10 
ProdomA0A071CK10 
UniProtKBA0A073FNG4RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A073FNG4 
PFAMA0A073FNG4 
ProdomA0A073FNG4 
UniProtKBA0A074HIY3RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A074HIY3 
PFAMA0A074HIY3 
ProdomA0A074HIY3 
UniProtKBA0A079F611RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A079F611 
PFAMA0A079F611 
ProdomA0A079F611 
UniProtKBA0A079H7V0RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A079H7V0 
PFAMA0A079H7V0 
ProdomA0A079H7V0 
UniProtKBA0A080FHN1RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A080FHN1 
PFAMA0A080FHN1 
ProdomA0A080FHN1 
UniProtKBA0A094WEA1RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A094WEA1 
PFAMA0A094WEA1 
ProdomA0A094WEA1 
UniProtKBA0A0E3N0R7RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A0E3N0R7 
PFAMA0A0E3N0R7 
ProdomA0A0E3N0R7 
UniProtKBN3ZAD5RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3ZAD5 
PFAMN3ZAD5 
ProdomN3ZAD5 
UniProtKBN4A228RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN4A228 
PFAMN4A228 
ProdomN4A228 
UniProtKBN2X305RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN2X305 
PFAMN2X305 
ProdomN2X305 
UniProtKBN2YK03RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN2YK03 
PFAMN2YK03 
ProdomN2YK03 
UniProtKBN3E350RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3E350 
PFAMN3E350 
ProdomN3E350 
UniProtKBN3FLW0RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3FLW0 
PFAMN3FLW0 
ProdomN3FLW0 
UniProtKBN3GRJ6RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3GRJ6 
PFAMN3GRJ6 
ProdomN3GRJ6 
UniProtKBN3HSU8RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3HSU8 
PFAMN3HSU8 
ProdomN3HSU8 
UniProtKBN3QDI0RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3QDI0 
PFAMN3QDI0 
ProdomN3QDI0 
UniProtKBN3RH35RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3RH35 
PFAMN3RH35 
ProdomN3RH35 
UniProtKBN3T102RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3T102 
PFAMN3T102 
ProdomN3T102 
UniProtKBN2MI71RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN2MI71 
PFAMN2MI71 
ProdomN2MI71 
UniProtKBN2GKU5RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProN2GKU5 
PFAMN2GKU5 
ProdomN2GKU5 
UniProtKBI4NDY8RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProI4NDY8 
PFAMI4NDY8 
ProdomI4NDY8 
UniProtKBL9B1Q6RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProL9B1Q6 
PFAML9B1Q6 
ProdomL9B1Q6 
UniProtKBL9CGM7RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProL9CGM7 
PFAML9CGM7 
ProdomL9CGM7 
UniProtKBM2N2Q9RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProM2N2Q9 
PFAMM2N2Q9 
ProdomM2N2Q9 
UniProtKBM2N455RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProM2N455 
PFAMM2N455 
ProdomM2N455 
UniProtKBM8S986RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProM8S986 
PFAMM8S986 
ProdomM8S986 
UniProtKBM9DV60RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProM9DV60 
PFAMM9DV60 
ProdomM9DV60 
UniProtKBM9FA18RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProM9FA18 
PFAMM9FA18 
ProdomM9FA18 
UniProtKBM9HRB1RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProM9HRB1 
PFAMM9HRB1 
ProdomM9HRB1 
UniProtKBN3TVV7RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN3TVV7 
PFAMN3TVV7 
ProdomN3TVV7 
UniProtKBA0A070YE54RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A070YE54 
PFAMA0A070YE54 
ProdomA0A070YE54 
UniProtKBA0A070SXG3RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A070SXG3 
PFAMA0A070SXG3 
ProdomA0A070SXG3 
UniProtKBN1ST27RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN1ST27 
PFAMN1ST27 
ProdomN1ST27 
UniProtKBN4PDE4RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN4PDE4 
PFAMN4PDE4 
ProdomN4PDE4 
UniProtKBN4PKY6RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN4PKY6 
PFAMN4PKY6 
ProdomN4PKY6 
UniProtKBN6W5Z0RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN6W5Z0 
PFAMN6W5Z0 
ProdomN6W5Z0 
UniProtKBN4SGW1RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN4SGW1 
PFAMN4SGW1 
ProdomN4SGW1 
UniProtKBU0XA45SubName: Full=tRNA dihydrouridine synthase A family protein;EC=1.-.-.-;
InterProU0XA45 
PFAMU0XA45 
ProdomU0XA45 
UniProtKBN4PPK8RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN4PPK8 
PFAMN4PPK8 
ProdomN4PPK8 
UniProtKBU0G0N4SubName: Full=tRNA dihydrouridine synthase A family protein;EC=1.-.-.-;
InterProU0G0N4 
PFAMU0G0N4 
ProdomU0G0N4 
UniProtKBU0F7D3SubName: Full=tRNA dihydrouridine synthase A family protein;EC=1.-.-.-;
InterProU0F7D3 
PFAMU0F7D3 
ProdomU0F7D3 
UniProtKBP32695RecName: Full=tRNA-dihydrouridine synthase A;EC=1.-.-.-;
InterProP32695 
PFAMP32695 
ProdomP32695 
UniProtKBA0A070P3R3RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A070P3R3 
PFAMA0A070P3R3 
ProdomA0A070P3R3 
UniProtKBA0A029P2S2RecName: Full=tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621};EC=1.3.1.- {ECO:0000256|PIRNR:PIRNR006621};
InterProA0A029P2S2 
PFAMA0A029P2S2 
ProdomA0A029P2S2 
UniProtKBU0SX07SubName: Full=tRNA dihydrouridine synthase A family protein;EC=1.-.-.-;
InterProU0SX07 
PFAMU0SX07 
ProdomU0SX07 
UniProtKBU0GD03SubName: Full=tRNA dihydrouridine synthase A family protein;EC=1.-.-.-;
InterProU0GD03 
PFAMU0GD03 
ProdomU0GD03 
UniProtKBQ8X5V6RecName: Full=tRNA-dihydrouridine synthase A;EC=1.-.-.-;
InterProQ8X5V6 
PFAMQ8X5V6 
ProdomQ8X5V6 
UniProtKBQ2M6Q5RecName: Full=tRNA-dihydrouridine synthase A;EC=1.-.-.-;
InterProQ2M6Q5 
PFAMQ2M6Q5 
ProdomQ2M6Q5 
UniProtKBP76786RecName: Full=tRNA-dihydrouridine synthase A;EC=1.-.-.-;
InterProP76786 
PFAMP76786 
ProdomP76786 
UniProtKBN4LZQ8RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProN4LZQ8 
PFAMN4LZQ8 
ProdomN4LZQ8 
UniProtKBI4NDY8RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProI4NDY8 
PFAMI4NDY8 
ProdomI4NDY8 
UniProtKBD6I3T7RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProD6I3T7 
PFAMD6I3T7 
ProdomD6I3T7 
UniProtKBD7JI59RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProD7JI59 
PFAMD7JI59 
ProdomD7JI59 
UniProtKBD6J532RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProD6J532 
PFAMD6J532 
ProdomD6J532 
UniProtKBD6IIM2RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProD6IIM2 
PFAMD6IIM2 
ProdomD6IIM2 
UniProtKBA0A7U8ZIT1SubName: Full=tRNA dihydrouridine synthase A {ECO:0000313|EMBL:EFF02616.2}
InterProA0A7U8ZIT1 
PFAMA0A7U8ZIT1 
ProdomA0A7U8ZIT1 
UniProtKBA0A7U9FF45SubName: Full=tRNA-dihydrouridine synthase A {ECO:0000313|EMBL:EFI22050.1}
InterProA0A7U9FF45 
PFAMA0A7U9FF45 
ProdomA0A7U9FF45 
UniProtKBA0A6C8H8Y1tRNA-dihydrouridine(20/20a) synthase {ECO:0000256|HAMAP-Rule:MF_02041}EC=1.3.1.91 {ECO:0000256|HAMAP-Rule:MF_02041}AltName: Full=U20-specific dihydrouridine synthase {ECO:0000256|HAMAP-Rule:MF_02041}S
InterProA0A6C8H8Y1 
PFAMA0A6C8H8Y1 
ProdomA0A6C8H8Y1 
UniProtKBC5A142RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProC5A142 
PFAMC5A142 
ProdomC5A142 
UniProtKBA0A1E2VGM1tRNA-dihydrouridine(20/20a) synthase {ECO:0000256|HAMAP-Rule:MF_02041}EC=1.3.1.91 {ECO:0000256|HAMAP-Rule:MF_02041}AltName: Full=U20-specific dihydrouridine synthase {ECO:0000256|HAMAP-Rule:MF_02041}S
InterProA0A1E2VGM1 
PFAMA0A1E2VGM1 
ProdomA0A1E2VGM1 
UniProtKBD3GT29RecName: Full=tRNA-dihydrouridine synthase;EC=1.-.-.-;
InterProD3GT29 
PFAMD3GT29 
ProdomD3GT29 
UniProtKBQ8X5V6.2DUSA_ECO57 RecName: Full=tRNA-dihydrouridine synthase A
InterProQ8X5V6.2 
PFAMQ8X5V6.2 
ProdomQ8X5V6.2 
UniProtKBP32695RecName: Full=tRNA-dihydrouridine synthase A;EC=1.-.-.-;
InterProP32695 
PFAMP32695 
ProdomP32695 
UniProtKBQ2M6Q5RecName: Full=tRNA-dihydrouridine synthase A;EC=1.-.-.-;
InterProQ2M6Q5 
PFAMQ2M6Q5 
ProdomQ2M6Q5 
UniProtKBP32695.3DUSA_ECOLI RecName: Full=tRNA-dihydrouridine synthase A
InterProP32695.3 
PFAMP32695.3 
ProdomP32695.3 
UniProtKBP76786RecName: Full=tRNA-dihydrouridine synthase A;EC=1.-.-.-;
InterProP76786 
PFAMP76786 
ProdomP76786 
UniProtKBQ8X5V6RecName: Full=tRNA-dihydrouridine synthase A;EC=1.-.-.-;
InterProQ8X5V6 
PFAMQ8X5V6 
ProdomQ8X5V6 
RefSeqNP_418473.2 tRNA-dihydrouridine synthase A [Escherichia coli str. K-12 substr. MG1655]
RefSeqZP_06988099.1 tRNA-dihydrouridine synthase A [Escherichia coli FVEC1302]
RefSeqZP_06646784.1 tRNA dihydrouridine synthase A [Escherichia coli FVEC1412]
RefSeqZP_06651621.1 tRNA-dihydrouridine synthase A [Escherichia coli B354]
RefSeqZP_06664761.1 tRNA-dihydrouridine synthase A [Escherichia coli B088]
RefSeqYP_002928954.1 tRNA-dihydrouridine synthase A [Escherichia coli BW2952]
GenPept3183570DUSA_ECOLI RecName: Full=tRNA-dihydrouridine synthase A
GenPept291429602tRNA dihydrouridine synthase A
GenPept238863713tRNA-dihydrouridine synthase A
GenPept808719864tRNA-dihydrouridine synthase A
GenPept298378215 tRNA-dihydrouridine synthase A [Escherichia coli FVEC1302]
GenPept808724233tRNA-dihydrouridine synthase A
GenPept808715451tRNA-dihydrouridine synthase A
GenPept808732548tRNA-dihydrouridine synthase A
GenPept808706730tRNA-dihydrouridine synthase A
GenPept808702358tRNA-dihydrouridine synthase A
GenPept808736987tRNA-dihydrouridine synthase A
GenPept808711083tRNA-dihydrouridine synthase A
GenPept38604936DUSA_ECO57 RecName: Full=tRNA-dihydrouridine synthase A