University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P26616
Original Database ID tr D8ATZ7
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation nad-dependent malic enzyme (ec
1.1.1.38) (nad-me)
Sequence Length 574

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region9-569
Protein Length574
Template PDB Code1o0sA
Template Region13-577
Sequence Identity40%
E-Value0
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1o0scrystal structure of ascaris suum malic enzyme complexed with nadh
DBALI1o0sA 
CATH3.40.50.720 Domain: 1o0sA04 NAD(P)-binding Rossmann-like Domain (100%)
JenaImageLibrary1o0s 
Target Sequence
UniProtKBV1ADL9RecName: Full=NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619};Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};
InterProV1ADL9 
PFAMV1ADL9 
ProdomV1ADL9 
UniProtKBD8ATZ7RecName: Full=NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619};Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};
InterProD8ATZ7 
PFAMD8ATZ7 
ProdomD8ATZ7 
UniProtKBD8BRI0RecName: Full=NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619};Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};
InterProD8BRI0 
PFAMD8BRI0 
ProdomD8BRI0 
UniProtKBE1IT48RecName: Full=NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619};Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};
InterProE1IT48 
PFAME1IT48 
ProdomE1IT48 
UniProtKBE9WSS7RecName: Full=NAD-dependent malic enzyme;Short=NAD-ME;EC=1.1.1.38;
InterProE9WSS7 
PFAME9WSS7 
ProdomE9WSS7 
UniProtKBF4SIR7RecName: Full=NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619};Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};
InterProF4SIR7 
PFAMF4SIR7 
ProdomF4SIR7 
UniProtKBI2XEW9RecName: Full=NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619};Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};
InterProI2XEW9 
PFAMI2XEW9 
ProdomI2XEW9 
UniProtKBI2YID5RecName: Full=NAD-dependent malic enzyme;Short=NAD-ME;EC=1.1.1.38;
InterProI2YID5 
PFAMI2YID5 
ProdomI2YID5 
UniProtKBL8BZY3RecName: Full=NAD-dependent malic enzyme;Short=NAD-ME;EC=1.1.1.38;
InterProL8BZY3 
PFAML8BZY3 
ProdomL8BZY3 
UniProtKBE9WEL2RecName: Full=NAD-dependent malic enzyme;Short=NAD-ME;EC=1.1.1.38;
InterProE9WEL2 
PFAME9WEL2 
ProdomE9WEL2 
UniProtKBK5BS68RecName: Full=NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619};Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};
InterProK5BS68 
PFAMK5BS68 
ProdomK5BS68 
UniProtKBE9WSS7RecName: Full=NAD-dependent malic enzyme;Short=NAD-ME;EC=1.1.1.38;
InterProE9WSS7 
PFAME9WSS7 
ProdomE9WSS7 
UniProtKBE9WEL2RecName: Full=NAD-dependent malic enzyme;Short=NAD-ME;EC=1.1.1.38;
InterProE9WEL2 
PFAME9WEL2 
ProdomE9WEL2 
UniProtKBE1IT48RecName: Full=NAD-dependent malic enzyme;Short=NAD-ME;EC=1.1.1.38;
InterProE1IT48 
PFAME1IT48 
ProdomE1IT48 
UniProtKBF4SIR7RecName: Full=NAD-dependent malic enzyme;Short=NAD-ME;EC=1.1.1.38;
InterProF4SIR7 
PFAMF4SIR7 
ProdomF4SIR7 
UniProtKBD8BRI0RecName: Full=NAD-dependent malic enzyme;Short=NAD-ME;EC=1.1.1.38;
InterProD8BRI0 
PFAMD8BRI0 
ProdomD8BRI0 
UniProtKBD8ATZ7RecName: Full=NAD-dependent malic enzyme;Short=NAD-ME;EC=1.1.1.38;
InterProD8ATZ7 
PFAMD8ATZ7 
ProdomD8ATZ7 
UniProtKBI2XEW9SubName: Full=Malic enzyme, NAD-binding domain protein;
InterProI2XEW9 
PFAMI2XEW9 
ProdomI2XEW9 
UniProtKBA0A1X3JIE6NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619}Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619}EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619}
InterProA0A1X3JIE6 
PFAMA0A1X3JIE6 
ProdomA0A1X3JIE6 
UniProtKBI2YID5SubName: Full=Malic enzyme, NAD-binding domain protein;
InterProI2YID5 
PFAMI2YID5 
ProdomI2YID5 
UniProtKBP26616NAD-dependent malic enzyme (EC 1.1.1.38) (NAD-ME)
InterProP26616 
PFAMP26616 
ProdomP26616 
RefSeqZP_07182841.1 malic enzyme, NAD binding domain protein [Escherichia coli MS 196-1]
RefSeqZP_07164827.1 malic enzyme, NAD binding domain protein [Escherichia coli MS 116-1]
GenPept16129438 (NC_000913) NAD-linked malate dehydrogenase (malic enzyme) [Escherichia coli K12]
GenPept162529430Sequence 6 from patent US 7306933
GenPept1742432SfcA protein (fragment)
GenPept1742421SfcA protein (fragment)
GenPept167274032Sequence 834 from patent US 7314974
GenPept1742411SfcA protein (fragment)
GenPept77732589unnamed protein product
GenPept301018335 malic enzyme, NAD binding domain protein [Escherichia coli MS 196-1]
GenPept331038858NAD-dependent malic enzyme (NAD-ME)
GenPept353296228Sequence 6 from patent US 8030036
GenPept390152617Sequence 12 from patent US 8105806
GenPept59890198unnamed protein product
GenPept7431233B64901 malate dehydrogenase (oxaloacetate-decarboxylating) (EC 1.1.1.38), NAD-linked - Escherichia coli
GenPept300449747 malic enzyme, NAD binding domain protein [Escherichia coli MS 116-1]
GenPept932859399NAD-dependent malic enzyme
GenPept299882528 malic enzyme, NAD binding domain protein [Escherichia coli MS 196-1]
GenPept2506831MAO1_ECOLI NAD-DEPENDENT MALIC ENZYME (NAD-ME)
GenPept1787754NAD-linked malate dehydrogenase (malic enzyme); NAD-linked malate dehydrogenase
GenPept300950951 malic enzyme, NAD binding domain protein [Escherichia coli MS 116-1]
GenBankEFK13367.1 malic enzyme, NAD binding domain protein [Escherichia coli MS 116-1]
GenBankEFI90739.1 malic enzyme, NAD binding domain protein [Escherichia coli MS 196-1]