University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1657560
Original Database ID tr E1HRT3
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation substrate-binding protein
Sequence Length 339

Dataset Information:

The newest dataset for this sequence was created on 2011-01-18. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region65-324
Protein Length339
Template PDB Code2i6eA
Template Region33-283
Sequence Identity16%
E-Value2e-24
GA3410.36
Datasetnysgxrc_2i6e_906
ModPipe VersionModPipe1.0
Model Date2006-09-26

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2i6ecrystal structure of protein dr0370 from deinococcus radiodurans, pfam duf178
DBALI2i6eA 
CATH3.40.190.10 Domain: 2i6eA01 Periplasmic binding protein-like II (100%)
CATH3.40.190.10 Domain: 2i6eA02 Periplasmic binding protein-like II (100%)
JenaImageLibrary2i6e 
Target Sequence
UniProtKBF4SIX8SubName: Full=Taurine ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:EGI09898.1};
InterProF4SIX8 
PFAMF4SIX8 
ProdomF4SIX8 
UniProtKBE1HRT3SubName: Full=Taurine ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:EFK89373.1};
InterProE1HRT3 
PFAME1HRT3 
ProdomE1HRT3 
UniProtKBF4SIX8SubName: Full=Taurine ABC transporter, periplasmic binding protein;
InterProF4SIX8 
PFAMF4SIX8 
ProdomF4SIX8 
UniProtKBE1HRT3SubName: Full=Taurine ABC transporter, periplasmic binding protein;
InterProE1HRT3 
PFAME1HRT3 
ProdomE1HRT3 
RefSeqZP_07247096.1 taurine ABC transporter, periplasmic binding protein [Escherichia coli MS 146-1]
GenPept16128350 (NC_000913) taurine transport system periplasmic protein [Escherichia coli K12]
GenPept331037678taurine ABC transporter, periplasmic binding protein
GenPept301647279 taurine ABC transporter, periplasmic binding protein [Escherichia coli MS 146-1]
GenPept301074567 taurine ABC transporter, periplasmic binding protein [Escherichia coli MS 146-1]
GenPept1786562taurine transport system periplasmic protein; taurine transport protein (ABC superfamily, peri_bind
GenPept1657560substrate-binding protein
GenBankEFK89373.1 taurine ABC transporter, periplasmic binding protein [Escherichia coli MS 146-1]
GenBankAAB18088.1 substrate-binding protein [Escherichia coli str. K-12 substr. MG1655]