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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 60594288
Original Database ID UP P09394
Organism Escherichia coli
Annotation b chain b, crystal structure of
periplasmic glycerophosphodiester
phosphodiester ase from escherichia
coli
Sequence Length 356

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region29-356
Protein Length356
Template PDB Code1ydyA
Template Region29-356
Sequence Identity100%
E-Value0
GA3411
MPQS2.19415
z-DOPE-1.82
TSVMod MethodMSALL
TSVMod RMSD0.386
TSVMod NO350.953
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1ydycrystal structure of periplasmic glycerophosphodiester phosphodiesterase from escherichia coli
DBALI1ydyA 
CATH3.20.20.190 Domain: 1ydyA00 Phosphatidylinositol (PI) phosphodiesterase (100%)
JenaImageLibrary1ydy 
Target Sequence
PDB1YDYB Chain B, Crystal Structure Of Periplasmic Glycerophosphodiester Phosphodiesterase From Escherichia Coli
PDB1YDYAChain A, Crystal Structure Of Periplasmic Glycerophosphodiester Phosphodiesterase From Escherichia Coli
PDB1YDYBChain B, Crystal Structure Of Periplasmic Glycerophosphodiester Phosphodiesterase From Escherichia Coli
GenPept60594287A Chain A, Crystal Structure Of Periplasmic Glycerophosphodiester Phosphodiesterase From Escherichia Coli
GenPept60594288B Chain B, Crystal Structure Of Periplasmic Glycerophosphodiester Phosphodiesterase From Escherichia Coli