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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 51247610
Original Database ID UP P09394
Organism
Annotation d chain d, structural genomics,
crystal structure of glycerophosphoryl
diester p hosphodiesterase from
e. coli
Sequence Length 336

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region7-334
Protein Length336
Template PDB Code1ydyA
Template Region29-356
Sequence Identity97%
E-Value0
GA3411
MPQS2.20279
z-DOPE-1.67
TSVMod MethodMTALL
TSVMod RMSD0.175
TSVMod NO351
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1ydycrystal structure of periplasmic glycerophosphodiester phosphodiesterase from escherichia coli
DBALI1ydyA 
CATH3.20.20.190 Domain: 1ydyA00 Phosphatidylinositol (PI) phosphodiesterase (100%)
JenaImageLibrary1ydy 
Target Sequence
PDB1T8QD Chain D, Structural Genomics, Crystal Structure Of Glycerophosphoryl Diester Phosphodiesterase From E. Coli
PDB1T8QAChain A, Structural Genomics, Crystal Structure Of Glycerophosphoryl Diester Phosphodiesterase From E. Coli
PDB1T8QBChain B, Structural Genomics, Crystal Structure Of Glycerophosphoryl Diester Phosphodiesterase From E. Coli
PDB1T8QCChain C, Structural Genomics, Crystal Structure Of Glycerophosphoryl Diester Phosphodiesterase From E. Coli
PDB1T8QDChain D, Structural Genomics, Crystal Structure Of Glycerophosphoryl Diester Phosphodiesterase From E. Coli
GenPept51247607A Chain A, Structural Genomics, Crystal Structure Of Glycerophosphoryl Diester Phosphodiesterase From E. Coli
GenPept51247608B Chain B, Structural Genomics, Crystal Structure Of Glycerophosphoryl Diester Phosphodiesterase From E. Coli
GenPept51247609C Chain C, Structural Genomics, Crystal Structure Of Glycerophosphoryl Diester Phosphodiesterase From E. Coli
GenPept51247610D Chain D, Structural Genomics, Crystal Structure Of Glycerophosphoryl Diester Phosphodiesterase From E. Coli