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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P27111
Original Database ID GI 301021015
Organism Escherichia coli MS 196-1, Escherichia coli O5:K4(L):H4
str. ATCC 23502, etc.
Annotation hth-type transcriptional regulator
cynr (cyn operon transcriptionalactivator)
Sequence Length 311

Dataset Information:

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Model Information

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Target Region104-303
Protein Length311
Template PDB Code1twyA
Template Region29-264
Sequence Identity15%
E-Value0
GA3410.72
MPQS0.594887
z-DOPE0.49
TSVMod MethodMTALL
TSVMod RMSD9.981
TSVMod NO350.386
DatasetTB_1twyA_20091007-92284
ModPipe VersionSVN.r1278
Model Date2010-11-03

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1twycrystal structure of hypothetical abc-type phosphate transporter
DBALI1twyA 
CATH3.40.190.10 Domain: 1twyA01 Periplasmic binding protein-like II (89%)
CATH3.40.190.10 Domain: 1twyA02 Periplasmic binding protein-like II (100%)
JenaImageLibrary1twy 
Target Sequence
UniProtKBU0BI34SubName: Full=HTH-type transcriptional regulator CynR;
InterProU0BI34 
PFAMU0BI34 
ProdomU0BI34 
UniProtKBD8BTW7SubName: Full=Cyn operon transcriptional activator CynR {ECO:0000313|EMBL:EFI89891.1};
InterProD8BTW7 
PFAMD8BTW7 
ProdomD8BTW7 
UniProtKBL8CK14SubName: Full=Cyn operon transcriptional activator;
InterProL8CK14 
PFAML8CK14 
ProdomL8CK14 
UniProtKBD8BTW7SubName: Full=Cyn operon transcriptional activator CynR;
InterProD8BTW7 
PFAMD8BTW7 
ProdomD8BTW7 
UniProtKBQ2MC86HTH-type transcriptional regulator cynR (Cyn operon transcriptionalactivator)
InterProQ2MC86 
PFAMQ2MC86 
ProdomQ2MC86 
UniProtKBP27111HTH-type transcriptional regulator cynR (Cyn operon transcriptionalactivator)
InterProP27111 
PFAMP27111 
ProdomP27111 
RefSeqZP_07185061.1 cyn operon transcriptional activator CynR [Escherichia coli MS 196-1]
GenPept13432106CYNR_ECOLI CYN OPERON TRANSCRIPTIONAL ACTIVATOR
GenPept301021015 cyn operon transcriptional activator CynR [Escherichia coli MS 196-1]
GenPept299881680 cyn operon transcriptional activator CynR [Escherichia coli MS 196-1]
GenBankEFI89891.1 cyn operon transcriptional activator CynR [Escherichia coli MS 196-1]