University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 396335
Original Database ID gi 396335
Organism Escherichia coli, Escherichia coli K-12
Annotation orf_o257
Sequence Length 257

Dataset Information:

The newest dataset for this sequence was created on 2009-04-16. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region122-255
Protein Length257
Template PDB Code3f13A
Template Region11-135
Sequence Identity19%
E-Value5e-12
GA3411
Datasetnysgxrc_3f13_1108
ModPipe Version
Model Date2008-11-27

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3f13crystal structure of putative nudix hydrolase family member from chromobacterium violaceum
DBALI3f13A 
JenaImageLibrary3f13 
Target Sequence
UniProtKBP32664NADH pyrophosphatase (EC 3.6.1.-)
InterProP32664 
PFAMP32664 
ProdomP32664 
2105267A2105267A NADH pyrophosphatase
GenPept10940522105267A NADH pyrophosphatase
GenPept16131826 (NC_000913) orf, hypothetical protein [Escherichia coli K12]
GenPept1790429orf, hypothetical protein
GenPept396335ORF_o257
GenPept418527NUDC_ECOLI NADH PYROPHOSPHATASE
GenPept7429302G65206 hypothetical 29.8 kD protein in thic-heme intergenic region - Escherichia coli (strain K-12)
GenBankAAC43094.1 ORF_o257 [Escherichia coli str. K-12 substr. MG1655]