University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q9UMZ3.2
Original Database ID sp Q9UMZ3
Organism Homo sapiens
Annotation ptprq_human recname: full=phosphotidylinositol
phosphatase ptprq; altname: full=
receptor-type tyrosine-protein
phosphatase q; short=ptp-rq; short=r-p
...
Sequence Length 2332

Dataset Information:

Only Template based calculation have been performed for this sequence. Template based calculations don't use all available PDB structures. To ensure that the most optimal template is used for this sequence, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region2022-2294
Protein Length2332
Template PDB Code2i1yA
Template Region696-971
Sequence Identity31%
E-Value0
GA3411
MPQS0.538267
z-DOPE-1.09
TSVMod MethodMTALL
TSVMod RMSD2.891
TSVMod NO350.854
DatasetTB_2i1yA_20091007-89686
ModPipe VersionSVN.r1278
Model Date2010-11-10

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2i1ycrystal structure of the phosphatase domain of human ptp ia-2
DBALI2i1yA 
CATH3.90.190.10 Domain: 2i1yA00 Protein tyrosine phosphatase superfamily (96%)
JenaImageLibrary2i1y 
Target Sequence
UniProtKBQ9UMZ3RecName: Full=Phosphatidylinositol phosphatase PTPRQ;EC=3.1.3.-;AltName: Full=Receptor-type tyrosine-protein phosphatase Q;Short=PTP-RQ;Short=R-PTP-Q;EC=3.1.3.48;Flags: Precursor;
InterProQ9UMZ3 
PFAMQ9UMZ3 
ProdomQ9UMZ3 
UniProtKBQ9UMZ3RecName: Full=Phosphatidylinositol phosphatase PTPRQ;EC=3.1.3.-;AltName: Full=Receptor-type tyrosine-protein phosphatase Q;Short=PTP-RQ;Short=R-PTP-Q;EC=3.1.3.48;Flags: Precursor;
InterProQ9UMZ3 
PFAMQ9UMZ3 
ProdomQ9UMZ3 
UniProtKBQ9UMZ3.2PTPRQ_HUMAN RecName: Full=Phosphotidylinositol phosphatase PTPRQ; AltName: Full=Receptor-type tyrosine-protein phosphatase Q; Short=PTP-RQ; Short=R-PTP-Q; Flags: Precursor
InterProQ9UMZ3.2 
PFAMQ9UMZ3.2 
ProdomQ9UMZ3.2 
GenPept158563998PTPRQ_HUMAN RecName: Full=Phosphotidylinositol phosphatase PTPRQ; AltName: Full=Receptor-type tyrosine-protein phosphatase Q; Short=PTP-RQ; Short=R-PTP-Q; Flags: Precursor