University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P24183
Original Database ID gi 2506864
Organism Escherichia coli, Escherichia coli K-12
Annotation formate dehydrogenase, nitrate-inducible,
major subunit (ec 1.2.1.2)(formate
deh ydrogenase-n subunit alpha)
(fdh-n subunit alpha)(anaerobic
formate d ...
Sequence Length 1015

Dataset Information:

The newest dataset for this sequence was created on 2007-09-24. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region31-1015
Protein Length1015
Template PDB Code1h0hA
Template Region1-977
Sequence Identity43%
E-Value0
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1h0htungsten containing formate dehydrogenase from desulfovibrio gigas ; SCOP: 76435 76436
DBALI1h0hA 
CATH3.40.50.740 Domain: 1h0hA02 Rossmann fold (100%)
CATH3.40.228.10 Domain: 1h0hA03 Dimethylsulfoxide Reductase, domain 2 (100%)
CATH2.40.40.20 Domain: 1h0hA04 Barwin-like endoglucanases (100%)
JenaImageLibrary1h0h 
Target Sequence
UniProtKBP24183Formate dehydrogenase, nitrate-inducible, major subunit (EC 1.2.1.2)(Formate dehydrogenase-N subunit alpha) (FDH-N subunit alpha)(Anaerobic formate dehydrogenase major subunit).
InterProP24183 
PFAMP24183 
ProdomP24183 
UniProtKBP78261Formate dehydrogenase, nitrate-inducible, major subunit (EC 1.2.1.2)(Formate dehydrogenase-N subunit alpha) (FDH-N subunit alpha)(Anaerobic formate dehydrogenase major subunit).
InterProP78261 
PFAMP78261 
ProdomP78261 
GenPept2506864FDNG_ECOLI FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, MAJOR SUBUNIT (FORMATE DEHYDROGENASE-N ALPHA SUBUNIT) (FDH-N ALPHA
GenPept443765272Sequence 17569 from patent US 8343764
GenPept7427709JS0628 formate dehydrogenase (EC 1.2.1.2) N (nitrate-inducible) alpha chain - Escherichia coli