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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 606330
Original Database ID GI 300946864
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation cg site no.484; alternate name
pona
Sequence Length 858

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region55-797
Protein Length858
Template PDB Code3udfA
Template Region28-728
Sequence Identity45%
E-Value0
GA3411
MPQS1.08337
z-DOPE0.57
TSVMod MethodMSALL
TSVMod RMSD9.81
TSVMod NO350.601
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3udf
DBALI3udfA 
JenaImageLibrary3udf 
Target Sequence
UniProtKBD8AIC4SubName: Full=Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EFK17093.1};
InterProD8AIC4 
PFAMD8AIC4 
ProdomD8AIC4 
UniProtKBD8B3S2SubName: Full=Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EFJ66262.1};
InterProD8B3S2 
PFAMD8B3S2 
ProdomD8B3S2 
UniProtKBE1HMY5SubName: Full=Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EFK90717.1};
InterProE1HMY5 
PFAME1HMY5 
ProdomE1HMY5 
UniProtKBC1NF17SubName: Full=Peptidoglycan synthetase;
InterProC1NF17 
PFAMC1NF17 
ProdomC1NF17 
UniProtKBF4SQC6SubName: Full=Penicillin-binding protein 1A (PBP-1a) (PBP1a) {ECO:0000313|EMBL:EGI08615.1};
InterProF4SQC6 
PFAMF4SQC6 
ProdomF4SQC6 
UniProtKBV1AR52SubName: Full=Penicillin-binding protein 1A {ECO:0000313|EMBL:ESE06715.1};
InterProV1AR52 
PFAMV1AR52 
ProdomV1AR52 
UniProtKBE1HMY5SubName: Full=Penicillin-binding protein, 1A family;
InterProE1HMY5 
PFAME1HMY5 
ProdomE1HMY5 
UniProtKBF4SQC6SubName: Full=Penicillin-binding protein 1A (PBP-1a) (PBP1a);
InterProF4SQC6 
PFAMF4SQC6 
ProdomF4SQC6 
UniProtKBC1NF17SubName: Full=Peptidoglycan synthetase;
InterProC1NF17 
PFAMC1NF17 
ProdomC1NF17 
UniProtKBD8B3S2SubName: Full=Penicillin-binding protein, 1A family;
InterProD8B3S2 
PFAMD8B3S2 
ProdomD8B3S2 
UniProtKBA0A1X3JBH3DD-transpeptidase {ECO:0000256|ARBA:ARBA00020219}EC=2.4.1.129 {ECO:0000256|ARBA:ARBA00012555}EC=3.4.16.4 {ECO:0000256|ARBA:ARBA00012448}AltName: Full=Penicillin-binding protein 1A {ECO:0000256|ARBA:AR
InterProA0A1X3JBH3 
PFAMA0A1X3JBH3 
ProdomA0A1X3JBH3 
UniProtKBD8AIC4SubName: Full=Penicillin-binding protein, 1A family;
InterProD8AIC4 
PFAMD8AIC4 
ProdomD8AIC4 
RefSeqZP_07245748.1 penicillin-binding protein, 1A family [Escherichia coli MS 146-1]
RefSeqZP_07168993.1 penicillin-binding protein, 1A family [Escherichia coli MS 175-1]
RefSeqZP_07161104.1 penicillin-binding protein, 1A family [Escherichia coli MS 116-1]
RefSeqZP_04872617.1 peptidoglycan synthetase [Escherichia sp. 1_1_43]
RefSeqWP_000773036.1peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA
GenPept16131273 (NC_000913) peptidoglycan synthetase; penicillin-binding protein 1A [Escherichia coli K12]
GenPept300946864 penicillin-binding protein, 1A family [Escherichia coli MS 116-1]
GenPept300956722 penicillin-binding protein, 1A family [Escherichia coli MS 175-1]
GenPept300316478 penicillin-binding protein, 1A family [Escherichia coli MS 175-1]
GenPept254038561 peptidoglycan synthetase [Escherichia sp. 1_1_43]
GenPept226839067peptidoglycan synthetase
GenPept1789799peptidoglycan synthetase; penicillin-binding protein 1A; bifunctional penicillin-binding protein 1a: transglycosylase (N-terminal); transpeptidase (C-terminal
GenPept301075911 penicillin-binding protein, 1A family [Escherichia coli MS 146-1]
GenPept301645833 penicillin-binding protein, 1A family [Escherichia coli MS 146-1]
GenPept331036389penicillin-binding protein 1A (PBP-1a) (PBP1a)
GenPept606330CG Site No.484; alternate name ponA
GenPept7428842ZPECPA penicillin-binding protein 1A - Escherichia coli
GenPept300453473 penicillin-binding protein, 1A family [Escherichia coli MS 116-1]
GenBankEFK90717.1 penicillin-binding protein, 1A family [Escherichia coli MS 146-1]
GenBankEFK17093.1 penicillin-binding protein, 1A family [Escherichia coli MS 116-1]
GenBankEFJ66262.1 penicillin-binding protein, 1A family [Escherichia coli MS 175-1]
GenBankEEH71090.1 peptidoglycan synthetase [Escherichia sp. 1_1_43]
GenBankAAA58193.1 CG Site No.484; alternate name ponA [Escherichia coli str. K-12 substr. MG1655]