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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 32482808
Original Database ID UP Q8WUI4
Organism Homo sapiens
Annotation histone deacetylase 7a variant
3
Sequence Length 915

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region482-888
Protein Length915
Template PDB Code1c3pA
Template Region3-373
Sequence Identity23%
E-Value 0
GA3411
MPQS0.58
z-DOPE-0.33
Datasethuman_4-2007
ModPipe VersionModPipe2.0
Model Date2007-08-06

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1c3pcrystal structure of an hdac homolog from aquifex aeolicus ; PFAM: PF00850 ; SCOP: 32606
DBALI1c3pA 
CATH3.40.800.20 Domain: 1c3pA00 Arginase; Chain A (100%)
JenaImageLibrary1c3p 
Target Sequence
RefSeqNP_057680.3 histone deacetylase 7A isoform b [Homo sapiens]
GenPept119578357histone deacetylase 7A, isoform CRA_b
GenPept32482808histone deacetylase 7A variant 3
GenPept314143537Sequence 2 from patent US 7745173
GenPept223625833Sequence 2 from patent US 7488587
GenPept148539866 histone deacetylase 7A isoform b [Homo sapiens]
GenBankEAW57953.1 histone deacetylase 7A, isoform CRA_b [Homo sapiens]
GenBankAAP84704.1 histone deacetylase 7A variant 3 [Homo sapiens]
ENSEMBLENSP00000351326Histone deacetylase 7a (HD7a). [Homo sapiens]
ENSEMBLENSP00000351326 
ENSEMBLENSP00000351326TDI sequence