University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 168177309
Original Database ID UP Q8WUI4
Organism
Annotation c chain c, crystal structure of
catalytic domain of human histone
deacetylase hd ac7 in complex
with trichostatin a (tsa)
Sequence Length 423

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region35-420
Protein Length423
Template PDB Code3c10A
Template Region515-900
Sequence Identity100%
E-Value0
GA3411
MPQS2.15913
z-DOPE-1.56
TSVMod MethodMTALL
TSVMod RMSD0.401
TSVMod NO350.951
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3c10crystal structure of catalytic domain of human histone deacetylase hdac7 in complex with trichostatin a (tsa)
DBALI3c10A 
CATH3.40.800.20 Domain: 3c10A00 Arginase; Chain A (100%)
JenaImageLibrary3c10 
Target Sequence
PDB3C0ZC Chain C, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Saha
PDB2NVRCChain C, Catalytic Domain Of Human Histone Deacetylase Hdac7
PDB3C0YC Chain C, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7
PDB3C0YAChain A, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7
PDB3C0YBChain B, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7
PDB3C0YCChain C, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7
PDB3C10CChain C, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Trichostatin A (Tsa)
PDB3C0ZAChain A, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Saha
PDB3C0ZBChain B, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Saha
PDB3C0ZCChain C, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Saha
PDB3C10C Chain C, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Trichostatin A (Tsa)
PDB3C10AChain A, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Trichostatin A (Tsa)
PDB2NVRBChain B, Catalytic Domain Of Human Histone Deacetylase Hdac7
PDB2NVRAChain A, Catalytic Domain Of Human Histone Deacetylase Hdac7
PDB2NVRC Chain C, Catalytic Domain Of Human Histone Deacetylase Hdac7
PDB3ZNSCChain C, Hdac7 Bound With Tfmo Inhibitor Tmp942
PDB3ZNSBChain B, Hdac7 Bound With Tfmo Inhibitor Tmp942
PDB3ZNSAChain A, Hdac7 Bound With Tfmo Inhibitor Tmp942
PDB3ZNRCChain C, Hdac7 Bound With Inhibitor Tmp269
PDB3ZNRBChain B, Hdac7 Bound With Inhibitor Tmp269
PDB3ZNRAChain A, Hdac7 Bound With Inhibitor Tmp269
PDB3C10BChain B, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Trichostatin A (Tsa)
GenPept471270355A Chain A, Hdac7 Bound With Inhibitor Tmp269
GenPept471270356B Chain B, Hdac7 Bound With Inhibitor Tmp269
GenPept471270357C Chain C, Hdac7 Bound With Inhibitor Tmp269
GenPept471270358A Chain A, Hdac7 Bound With Tfmo Inhibitor Tmp942
GenPept471270359B Chain B, Hdac7 Bound With Tfmo Inhibitor Tmp942
GenPept122921045A Chain A, Catalytic Domain Of Human Histone Deacetylase Hdac7
GenPept122921046B Chain B, Catalytic Domain Of Human Histone Deacetylase Hdac7
GenPept122921047C Chain C, Catalytic Domain Of Human Histone Deacetylase Hdac7
GenPept168177301A Chain A, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7
GenPept168177302B Chain B, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7
GenPept168177303C Chain C, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7
GenPept168177304A Chain A, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Saha
GenPept168177305B Chain B, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Saha
GenPept168177306C Chain C, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Saha
GenPept168177307A Chain A, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Trichostatin A (Tsa)
GenPept168177308B Chain B, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Trichostatin A (Tsa)
GenPept168177309C Chain C, Crystal Structure Of Catalytic Domain Of Human Histone Deacetylase Hdac7 In Complex With Trichostatin A (Tsa)
GenPept471270360C Chain C, Hdac7 Bound With Tfmo Inhibitor Tmp942