University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q7Z4K2
Original Database ID UP Q8WUI4
Organism Homo sapiens
Annotation subname: full=histone deacetylase
7a;
Sequence Length 614

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region177-562
Protein Length614
Template PDB Code3c10A
Template Region515-900
Sequence Identity100%
E-Value0
GA3411
MPQS1.87246
z-DOPE-1.54
TSVMod MethodMTALL
TSVMod RMSD0.402
TSVMod NO350.952
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3c10crystal structure of catalytic domain of human histone deacetylase hdac7 in complex with trichostatin a (tsa)
DBALI3c10A 
CATH3.40.800.20 Domain: 3c10A00 Arginase; Chain A (100%)
JenaImageLibrary3c10 
Target Sequence
UniProtKBQ7Z4K2SubName: Full=Histone deacetylase 7A;
InterProQ7Z4K2 
PFAMQ7Z4K2 
ProdomQ7Z4K2 
UniProtKBQ8WUI4Histone deacetylase 7A
InterProQ8WUI4 
PFAMQ8WUI4 
ProdomQ8WUI4 
GenPept18088166histone deacetylase 7A
GenPept32879885histone deacetylase 7A
GenBankAAP88773.1 histone deacetylase 7A [Homo sapiens]
UCSCGenomeBrowserQ7Z4K2 
UCSCGenomeBrowserQ8WUI4