University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A2UGF4
Original Database ID ref NP_417210.2
Organism Escherichia coli, Shigella boydii, etc.
Annotation hydrogenase expression/formation
protein hype.
Sequence Length 336

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region15-336
Protein Length336
Template PDB Code2rb9A
Template Region15-336
Sequence Identity98%
E-Value0
GA3411
MPQS2.13973
z-DOPE-1.11
TSVMod MethodMTALL
TSVMod RMSD2.226
TSVMod NO350.951
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2rb9crystal structure of e.coli hype
DBALI2rb9A 
JenaImageLibrary2rb9 
Target Sequence
UniProtKBS1LPZ7SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProS1LPZ7 
PFAMS1LPZ7 
ProdomS1LPZ7 
UniProtKBA0A069XHK2SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDU29171.1};
InterProA0A069XHK2 
PFAMA0A069XHK2 
ProdomA0A069XHK2 
UniProtKBA0A069YSN3SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDU50140.1};
InterProA0A069YSN3 
PFAMA0A069YSN3 
ProdomA0A069YSN3 
UniProtKBA0A070T3I6SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDX20568.1};
InterProA0A070T3I6 
PFAMA0A070T3I6 
ProdomA0A070T3I6 
UniProtKBA0A070YLI9SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDX87868.1};
InterProA0A070YLI9 
PFAMA0A070YLI9 
ProdomA0A070YLI9 
UniProtKBA0A071AQU9SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDY63515.1};
InterProA0A071AQU9 
PFAMA0A071AQU9 
ProdomA0A071AQU9 
UniProtKBA0A071BUT5SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDY85085.1};
InterProA0A071BUT5 
PFAMA0A071BUT5 
ProdomA0A071BUT5 
UniProtKBA0A071CDB9SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDZ16289.1};
InterProA0A071CDB9 
PFAMA0A071CDB9 
ProdomA0A071CDB9 
UniProtKBA0A071D5Q3SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDZ36412.1};
InterProA0A071D5Q3 
PFAMA0A071D5Q3 
ProdomA0A071D5Q3 
UniProtKBA0A073H0W0SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KEJ66992.1};
InterProA0A073H0W0 
PFAMA0A073H0W0 
ProdomA0A073H0W0 
UniProtKBA0A073TAP3SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KEL23140.1};
InterProA0A073TAP3 
PFAMA0A073TAP3 
ProdomA0A073TAP3 
UniProtKBA0A037YES2SubName: Full=Carbamoyl dehydratase HypE {ECO:0000313|EMBL:KHI93509.1};SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:CEE04014.1};SubName: Full=Hydrogenase expression/fo
InterProA0A037YES2 
PFAMA0A037YES2 
ProdomA0A037YES2 
UniProtKBB1IUU9SubName: Full=Hydrogenase expression/formation protein HypE;
InterProB1IUU9 
PFAMB1IUU9 
ProdomB1IUU9 
UniProtKBI2ZUK9SubName: Full=Hydrogenase expression/formation protein HypE;
InterProI2ZUK9 
PFAMI2ZUK9 
ProdomI2ZUK9 
UniProtKBH4UMZ2SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EHV55820.1};
InterProH4UMZ2 
PFAMH4UMZ2 
ProdomH4UMZ2 
UniProtKBH4VKA0SubName: Full=Hydrogenase expression/formation protein HypE;
InterProH4VKA0 
PFAMH4VKA0 
ProdomH4VKA0 
UniProtKBT6NBA0SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProT6NBA0 
PFAMT6NBA0 
ProdomT6NBA0 
UniProtKBT7KID0SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProT7KID0 
PFAMT7KID0 
ProdomT7KID0 
UniProtKBI2HZX8SubName: Full=Hydrogenase expression/formation protein HypE;
InterProI2HZX8 
PFAMI2HZX8 
ProdomI2HZX8 
UniProtKBI2PBL1SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProI2PBL1 
PFAMI2PBL1 
ProdomI2PBL1 
UniProtKBT8G4Y2SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProT8G4Y2 
PFAMT8G4Y2 
ProdomT8G4Y2 
UniProtKBI2YAT0SubName: Full=Hydrogenase expression/formation protein HypE;
InterProI2YAT0 
PFAMI2YAT0 
ProdomI2YAT0 
UniProtKBT8CH60SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProT8CH60 
PFAMT8CH60 
ProdomT8CH60 
UniProtKBQ2MA99RecName: Full=Hydrogenase isoenzymes formation protein HypE;
InterProQ2MA99 
PFAMQ2MA99 
ProdomQ2MA99 
UniProtKBA0A074HN15SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KEN96181.1};
InterProA0A074HN15 
PFAMA0A074HN15 
ProdomA0A074HN15 
UniProtKBA0A079F8N1SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDY52428.1};
InterProA0A079F8N1 
PFAMA0A079F8N1 
ProdomA0A079F8N1 
UniProtKBM9H2G3SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EMX29271.1};
InterProM9H2G3 
PFAMM9H2G3 
ProdomM9H2G3 
UniProtKBN1SLY8SubName: Full=Hydrogenase expression/formation protein HypE;
InterProN1SLY8 
PFAMN1SLY8 
ProdomN1SLY8 
UniProtKBN2ERY8SubName: Full=Hydrogenase expression/formation protein HypE;
InterProN2ERY8 
PFAMN2ERY8 
ProdomN2ERY8 
UniProtKBN2RH14SubName: Full=Hydrogenase expression/formation protein HypE;
InterProN2RH14 
PFAMN2RH14 
ProdomN2RH14 
UniProtKBP24193RecName: Full=Hydrogenase isoenzymes formation protein HypE;
InterProP24193 
PFAMP24193 
ProdomP24193 
UniProtKBS0Z2U4SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProS0Z2U4 
PFAMS0Z2U4 
ProdomS0Z2U4 
UniProtKBS1A1Z4SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProS1A1Z4 
PFAMS1A1Z4 
ProdomS1A1Z4 
UniProtKBS1C7V6SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProS1C7V6 
PFAMS1C7V6 
ProdomS1C7V6 
UniProtKBS1EFE1SubName: Full=Hydrogenase isoenzymes formation protein hypE {ECO:0000313|EMBL:EOV77071.1};
InterProS1EFE1 
PFAMS1EFE1 
ProdomS1EFE1 
UniProtKBS1ES26SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProS1ES26 
PFAMS1ES26 
ProdomS1ES26 
UniProtKBM7W6L6SubName: Full=Carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein;
InterProM7W6L6 
PFAMM7W6L6 
ProdomM7W6L6 
UniProtKBM7UEB8SubName: Full=Carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein;
InterProM7UEB8 
PFAMM7UEB8 
ProdomM7UEB8 
UniProtKBM2NJ70SubName: Full=Carbamoyl dehydratase HypE;
InterProM2NJ70 
PFAMM2NJ70 
ProdomM2NJ70 
UniProtKBA0A079FX68SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDY66870.1};
InterProA0A079FX68 
PFAMA0A079FX68 
ProdomA0A079FX68 
UniProtKBA0A079H0U5SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDY96971.1};
InterProA0A079H0U5 
PFAMA0A079H0U5 
ProdomA0A079H0U5 
UniProtKBA0A080GL58SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KEN89020.1};
InterProA0A080GL58 
PFAMA0A080GL58 
ProdomA0A080GL58 
UniProtKBA0A080I0X8SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KEO22781.1};
InterProA0A080I0X8 
PFAMA0A080I0X8 
ProdomA0A080I0X8 
UniProtKBA0A0E1T2I1SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EDU63627.1};
InterProA0A0E1T2I1 
PFAMA0A0E1T2I1 
ProdomA0A0E1T2I1 
UniProtKBA0A0E3N2F9SubName: Full=Hydrogenase isoenzymes formation protein HypE {ECO:0000313|EMBL:AKA91782.1};
InterProA0A0E3N2F9 
PFAMA0A0E3N2F9 
ProdomA0A0E3N2F9 
UniProtKBA0A0G3I0Q9SubName: Full=Carbamoyl dehydratase, hydrogenases 1,2,3 maturation protein {ECO:0000313|EMBL:AKK18585.1};
InterProA0A0G3I0Q9 
PFAMA0A0G3I0Q9 
ProdomA0A0G3I0Q9 
UniProtKBL3ZNA3SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL3ZNA3 
PFAML3ZNA3 
ProdomL3ZNA3 
UniProtKBL4KAK3SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL4KAK3 
PFAML4KAK3 
ProdomL4KAK3 
UniProtKBL4NXF0SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL4NXF0 
PFAML4NXF0 
ProdomL4NXF0 
UniProtKBS1HYV8SubName: Full=Hydrogenase isoenzymes formation protein hypE {ECO:0000313|EMBL:EOW20660.1};
InterProS1HYV8 
PFAMS1HYV8 
ProdomS1HYV8 
UniProtKBG2BCV7SubName: Full=Hydrogenase expression/formation protein HypE;
InterProG2BCV7 
PFAMG2BCV7 
ProdomG2BCV7 
UniProtKBK3IMQ3SubName: Full=Hydrogenase expression/formation protein HypE;
InterProK3IMQ3 
PFAMK3IMQ3 
ProdomK3IMQ3 
UniProtKBI2QZ80SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProI2QZ80 
PFAMI2QZ80 
ProdomI2QZ80 
UniProtKBA8A3K8SubName: Full=Hydrogenase expression/formation protein HypE;
InterProA8A3K8 
PFAMA8A3K8 
ProdomA8A3K8 
UniProtKBB2N1E7SubName: Full=Hydrogenase expression/formation protein HypE;
InterProB2N1E7 
PFAMB2N1E7 
ProdomB2N1E7 
UniProtKBL3RC83SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL3RC83 
PFAML3RC83 
ProdomL3RC83 
UniProtKBC9R0F2SubName: Full=Carbamoyl dehydratase, hydrogenases 1,2,3maturation protein;SubName: Full=Hydrogenase expression/formation protein HypE;
InterProC9R0F2 
PFAMC9R0F2 
ProdomC9R0F2 
UniProtKBD8AZ60SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EFJ67889.1};
InterProD8AZ60 
PFAMD8AZ60 
ProdomD8AZ60 
UniProtKBL8CD05SubName: Full=[NiFe] hydrogenase metallocenter assembly protein HypE;
InterProL8CD05 
PFAML8CD05 
ProdomL8CD05 
UniProtKBN2KQY4SubName: Full=Hydrogenase expression/formation protein HypE;
InterProN2KQY4 
PFAMN2KQY4 
ProdomN2KQY4 
UniProtKBL3TJM8SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL3TJM8 
PFAML3TJM8 
ProdomL3TJM8 
UniProtKBS1JVK9SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProS1JVK9 
PFAMS1JVK9 
ProdomS1JVK9 
UniProtKBT7ZRE7SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProT7ZRE7 
PFAMT7ZRE7 
ProdomT7ZRE7 
UniProtKBS1P947SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProS1P947 
PFAMS1P947 
ProdomS1P947 
UniProtKBF4SNJ0SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EGI09110.1};
InterProF4SNJ0 
PFAMF4SNJ0 
ProdomF4SNJ0 
UniProtKBK3ILU6SubName: Full=Hydrogenase expression/formation protein HypE;
InterProK3ILU6 
PFAMK3ILU6 
ProdomK3ILU6 
UniProtKBE9YFM4SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EGB66774.1};
InterProE9YFM4 
PFAME9YFM4 
ProdomE9YFM4 
UniProtKBK5FMX1SubName: Full=Hydrogenase expression/formation protein HypE;
InterProK5FMX1 
PFAMK5FMX1 
ProdomK5FMX1 
UniProtKBD8AIN8SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EFK16999.1};
InterProD8AIN8 
PFAMD8AIN8 
ProdomD8AIN8 
UniProtKBS0V6H5SubName: Full=Hydrogenase isoenzymes formation protein hypE {ECO:0000313|EMBL:EOU57037.1};
InterProS0V6H5 
PFAMS0V6H5 
ProdomS0V6H5 
UniProtKBH4X8X8SubName: Full=Hydrogenase expression/formation protein HypE;
InterProH4X8X8 
PFAMH4X8X8 
ProdomH4X8X8 
UniProtKBI4TW39SubName: Full=Hydrogenase expression/formation protein HypE;
InterProI4TW39 
PFAMI4TW39 
ProdomI4TW39 
UniProtKBL3QS94SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL3QS94 
PFAML3QS94 
ProdomL3QS94 
UniProtKBL3WRT3SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL3WRT3 
PFAML3WRT3 
ProdomL3WRT3 
UniProtKBE2WXM9SubName: Full=Hydrogenase expression/formation protein HypE;
InterProE2WXM9 
PFAME2WXM9 
ProdomE2WXM9 
UniProtKBG2AYC1SubName: Full=Hydrogenase expression/formation protein HypE;
InterProG2AYC1 
PFAMG2AYC1 
ProdomG2AYC1 
UniProtKBG2F023SubName: Full=Hydrogenase expression/formation protein HypE;
InterProG2F023 
PFAMG2F023 
ProdomG2F023 
UniProtKBL3WHD6SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL3WHD6 
PFAML3WHD6 
ProdomL3WHD6 
UniProtKBD8C0N6SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EFI87512.1};
InterProD8C0N6 
PFAMD8C0N6 
ProdomD8C0N6 
UniProtKBE1HLH7SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EFK91214.1};
InterProE1HLH7 
PFAME1HLH7 
ProdomE1HLH7 
UniProtKBL8C3Q0SubName: Full=[NiFe] hydrogenase metallocenter assembly protein HypE;
InterProL8C3Q0 
PFAML8C3Q0 
ProdomL8C3Q0 
UniProtKBE6BAS1SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EFU95755.1};
InterProE6BAS1 
PFAME6BAS1 
ProdomE6BAS1 
UniProtKBL4WAD4SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL4WAD4 
PFAML4WAD4 
ProdomL4WAD4 
UniProtKBE9Y3P1SubName: Full=Hydrogenase expression/formation protein HypE;
InterProE9Y3P1 
PFAME9Y3P1 
ProdomE9Y3P1 
UniProtKBS0XGC2SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProS0XGC2 
PFAMS0XGC2 
ProdomS0XGC2 
UniProtKBF9QWT2SubName: Full=Hydrogenase expression/formation protein HypE;
InterProF9QWT2 
PFAMF9QWT2 
ProdomF9QWT2 
UniProtKBS0TVD7SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProS0TVD7 
PFAMS0TVD7 
ProdomS0TVD7 
UniProtKBL3VAF2SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL3VAF2 
PFAML3VAF2 
ProdomL3VAF2 
UniProtKBD7ZVP3SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EFK25023.1};
InterProD7ZVP3 
PFAMD7ZVP3 
ProdomD7ZVP3 
UniProtKBL2Z217SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProL2Z217 
PFAML2Z217 
ProdomL2Z217 
UniProtKBQ46886RecName: Full=Hydrogenase isoenzymes formation protein HypE;
InterProQ46886 
PFAMQ46886 
ProdomQ46886 
UniProtKBI0ZWE1SubName: Full=Hydrogenase expression/formation protein HypE;
InterProI0ZWE1 
PFAMI0ZWE1 
ProdomI0ZWE1 
UniProtKBT8S9V0SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProT8S9V0 
PFAMT8S9V0 
ProdomT8S9V0 
UniProtKBI2YLY4SubName: Full=Hydrogenase expression/formation protein HypE;
InterProI2YLY4 
PFAMI2YLY4 
ProdomI2YLY4 
UniProtKBK5FRM2SubName: Full=Hydrogenase expression/formation protein HypE;
InterProK5FRM2 
PFAMK5FRM2 
ProdomK5FRM2 
UniProtKBI4J7L4SubName: Full=Hydrogenase isoenzymes formation protein hypE {ECO:0000313|EMBL:EIF85223.1};
InterProI4J7L4 
PFAMI4J7L4 
ProdomI4J7L4 
UniProtKBL3KHU8SubName: Full=Hydrogenase isoenzymes formation protein hypE {ECO:0000313|EMBL:ELD97936.1};
InterProL3KHU8 
PFAML3KHU8 
ProdomL3KHU8 
UniProtKBB3XHE2SubName: Full=Hydrogenase expression/formation protein HypE;
InterProB3XHE2 
PFAMB3XHE2 
ProdomB3XHE2 
UniProtKBC6EJD8SubName: Full=Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ACT28061.1};
InterProC6EJD8 
PFAMC6EJD8 
ProdomC6EJD8 
UniProtKBS1KNJ8SubName: Full=Hydrogenase isoenzymes formation protein hypE;
InterProS1KNJ8 
PFAMS1KNJ8 
ProdomS1KNJ8