University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P32519
Original Database ID SN P32519_chr13:4040556
Organism Homo sapiens
Annotation ets-related transcription factor
elf-1 (e74-like factor 1).
Sequence Length 619

Dataset Information:

The newest dataset for this sequence was created on 2006-06-16. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region170-308
Protein Length619
Template PDB Code1gvjA
Template Region298-433
Sequence Identity38%
E-Value1e-35
GA3411
Datasetsnp-human4
ModPipe VersionModPipe1.0
Model Date2006-06-16

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1gvjets-1 dna binding and autoinhibitory domains
DBALI1gvjA 
CATH1.10.10.10 Domain: 1gvjA00 "winged helix" repressor DNA binding domain (96%)
JenaImageLibrary1gvj 
Target Sequence
UniProtKBP32519ETS-related transcription factor Elf-1 (E74-like factor 1).
InterProP32519 
PFAMP32519 
ProdomP32519 
UniProtKBQ9UDE1ETS-related transcription factor Elf-1 (E74-like factor 1).
InterProQ9UDE1 
PFAMQ9UDE1 
ProdomQ9UDE1 
GenPept280779A43361 Ets-related transcription factor Elf-1 - human
GenPept416947ELF1_HUMAN ETS-RELATED TRANSCRIPTION FACTOR ELF-1 (E74-LIKE FACTOR 1)
UCSCGenomeBrowserP32519