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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q99569
Original Database ID sp Q99569
Organism Homo sapiens
Annotation recname: full=plakophilin-4;altname:
full=p0071;
Sequence Length 1211

Dataset Information:

The newest dataset for this sequence was created on 2010-08-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region528-656
Protein Length1211
Template PDB Code1bk5A
Template Region260-382
Sequence Identity26%
E-Value0.43
GA3411
MPQS0.509924
z-DOPE-1.05
TSVMod MethodMSALL
TSVMod RMSD2.163
TSVMod NO350.903
DatasetMW-TB_Yeast_Import
ModPipe VersionSVN.r1278
Model Date2010-08-12

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1bk5karyopherin alpha from saccharomyces cerevisiae ; PFAM: PF00514 PF01749 ; SCOP: 19130
DBALI1bk5A 
JenaImageLibrary1bk5 
Target Sequence
UniProtKBQ99569RecName: Full=Plakophilin-4;AltName: Full=p0071;
InterProQ99569 
PFAMQ99569 
ProdomQ99569 
UniProtKBQ99569.1PKP4_HUMAN RecName: Full=Plakophilin-4; AltName: Full=p0071
InterProQ99569.1 
PFAMQ99569.1 
ProdomQ99569.1 
GenPept1702924p0071 protein
GenPept20139104PKP4_HUMAN RecName: Full=Plakophilin-4; AltName: Full=p0071
GenPept27291250Sequence 14 from patent US 6476193
GenPept4505843 plakophilin 4 [Homo sapiens]
EMBLCAA57478.1 
UCSCGenomeBrowserQ99569