University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q9NPB1
Original Database ID EN ENSP00000373674.4
Organism Homo sapiens
Annotation recname: full=5'(3')-deoxyribonucleotidase,
mitochondrial;short=5',3'-nucleotida
se, mitochondrial;ec=3.1.3.-;altname:
full=deoxy-5'-nucleotidase 2;sh
...
Sequence Length 228

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region32-227
Protein Length228
Template PDB Code4mumA
Template Region27-233
Sequence Identity98%
E-Value0
GA3411
MPQS2.06065
z-DOPE-1.47
TSVMod MethodMSALL
TSVMod RMSD0.377
TSVMod NO350.97
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4mum
DBALI4mumA 
JenaImageLibrary4mum 
Target Sequence
SFLD9910372Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
UniProtKBQ9NPB1RecName: Full=5'(3')-deoxyribonucleotidase, mitochondrial;Short=5',3'-nucleotidase, mitochondrial;EC=3.1.3.-;AltName: Full=Deoxy-5'-nucleotidase 2;Short=dNT-2;Flags: Precursor;
InterProQ9NPB1 
PFAMQ9NPB1 
ProdomQ9NPB1 
UniProtKBQ9NPB1.1NT5M_HUMAN RecName: Full=5'(3')-deoxyribonucleotidase, mitochondrial; Short=5',3'-nucleotidase, mitochondrial; AltName: Full=Deoxy-5'-nucleotidase 2; Short=dNT-2; Flags: Precursor
InterProQ9NPB1.1 
PFAMQ9NPB1.1 
ProdomQ9NPB1.1 
UniProtKBQ9NPB1RecName: Full=5'(3')-deoxyribonucleotidase, mitochondrial;Short=5',3'-nucleotidase, mitochondrial;EC=3.1.3.-;AltName: Full=Deoxy-5'-nucleotidase 2;Short=dNT-2;Flags: Precursor;
InterProQ9NPB1 
PFAMQ9NPB1 
ProdomQ9NPB1 
RefSeqNP_064586.1 5'(3')-deoxyribonucleotidase, mitochondrial precursor [Homo sapiens]
GenPept1195761145',3'-nucleotidase, mitochondrial
GenPept9910372 5'(3')-deoxyribonucleotidase, mitochondrial precursor [Homo sapiens]
GenPept9408106mitochondrial 5'(3')-deoxyribonucleotidase (dNT-2)
GenPept9309446AF210652_1 5'(3')-deoxyribonucleotidase
GenPept38258255NT5M_HUMAN RecName: Full=5'(3')-deoxyribonucleotidase, mitochondrial; Short=5',3'-nucleotidase, mitochondrial; AltName: Full=Deoxy-5'-nucleotidase 2; Short=dNT-2; Flags: Precursor
GenPept232735195',3'-nucleotidase, mitochondrial
GenPept13631174 5(3)-deoxyribonucleotidase (dNT-2); nuclear gene for mitochondri [Homo sapiens]
GenBankAAH35838.1 5',3'-nucleotidase, mitochondrial [Homo sapiens]
GenBankEAW55710.1 5',3'-nucleotidase, mitochondrial [Homo sapiens]
GenBankAAF87076.1AF210652_1 5'(3')-deoxyribonucleotidase [Homo sapiens]
EMBLCAB99251.1 
ENSEMBLENSP00000373674 
UCSCGenomeBrowserQ9NPB1