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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q96CK3
Original Database ID tr Q96CK3
Organism Homo sapiens
Annotation subname: full=cad protein;flags:
fragment;
Sequence Length 851

Dataset Information:

The newest dataset for this sequence was created on 2012-04-02. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region93-372
Protein Length851
Template PDB Code1yixA
Template Region3-260
Sequence Identity16%
E-Value0
GA3410.31
MPQS0.313625
z-DOPE0.24
TSVMod MethodMTALL
TSVMod RMSD8.26
TSVMod NO350.347
DatasetTB_1yixA_20091007-72859
ModPipe VersionSVN.r1278
Model Date2010-11-07

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-Mut Somatic mutation found in advanced pancreatic tumor for CCDS1742.1 G1286E
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1yixcrystal structure of ycfh, tatd homolog from escherichia coli k12, at 1.9 a resolution
DBALI1yixA 
JenaImageLibrary1yix 
Target Sequence
SFLD33989959Structure Function Linkage Database entry: Member of the Amidohydrolase superfamily.
UniProtKBQ96CK3SubName: Full=CAD protein;Flags: Fragment;
InterProQ96CK3 
PFAMQ96CK3 
ProdomQ96CK3 
UniProtKBQ96CK3SubName: Full=CAD protein;Flags: Fragment;
InterProQ96CK3 
PFAMQ96CK3 
ProdomQ96CK3 
GenPept33989959CAD protein, partial
GenBankAAH14178.2 CAD protein [Homo sapiens]
UCSCGenomeBrowserQ96CK3