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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A4D2I8
Original Database ID gi 21314682
Organism Homo sapiens
Annotation subname: full=cdna flj77566, highly
similar to homo sapiens transient
receptor p otential cation channel,
subfamily v, member 6 (trpv6),
mrna;subname: ...
Sequence Length 725

Dataset Information:

The newest dataset for this sequence was created on 2013-10-23. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region44-265
Protein Length725
Template PDB Code2rfaA
Template Region44-264
Sequence Identity90%
E-Value0
GA3411
MPQS1.40411
z-DOPE-1.07
TSVMod MethodMTALL
TSVMod RMSD0.196
TSVMod NO351
DatasetH_sapiens_2013_D1
ModPipe VersionSVN.r1513
Model Date2013-10-23

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2rfacrystal structure of the mouse trpv6 ankyrin repeat domain
DBALI2rfaA 
JenaImageLibrary2rfa 
Target Sequence
UniProtKBQ9H296RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ9H296 
PFAMQ9H296 
ProdomQ9H296 
UniProtKBQ8WXR8RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ8WXR8 
PFAMQ8WXR8 
ProdomQ8WXR8 
UniProtKBQ96LC5RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ96LC5 
PFAMQ96LC5 
ProdomQ96LC5 
UniProtKBA4D2I8RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProA4D2I8 
PFAMA4D2I8 
ProdomA4D2I8 
UniProtKBQ9H1D0RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ9H1D0 
PFAMQ9H1D0 
ProdomQ9H1D0 
UniProtKBQ8TDL3RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ8TDL3 
PFAMQ8TDL3 
ProdomQ8TDL3 
UniProtKBQ9H1D1RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ9H1D1 
PFAMQ9H1D1 
ProdomQ9H1D1 
UniProtKBQ8WXR8Calcium transport protein CaT1
InterProQ8WXR8 
PFAMQ8WXR8 
ProdomQ8WXR8 
UniProtKBQ9H1D0Transient receptor potential channel 6, subfamily V (TransientDE receptor potential cation channel subfamily V, member 6) (CalciumDE transport protein CaT1)
InterProQ9H1D0 
PFAMQ9H1D0 
ProdomQ9H1D0 
UniProtKBA4D2I8SubName: Full=cDNA FLJ77566, highly similar to Homo sapiens transient receptor potential cation channel, subfamily V, member 6 (TRPV6), mRNA;SubName: Full=Transient receptor potential cation channel,
InterProA4D2I8 
PFAMA4D2I8 
ProdomA4D2I8 
UniProtKBA4D2I8RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProA4D2I8 
PFAMA4D2I8 
ProdomA4D2I8 
UniProtKBQ8TDL3RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ8TDL3 
PFAMQ8TDL3 
ProdomQ8TDL3 
UniProtKBQ96LC5RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ96LC5 
PFAMQ96LC5 
ProdomQ96LC5 
UniProtKBQ9H296RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ9H296 
PFAMQ9H296 
ProdomQ9H296 
UniProtKBQ9H1D1RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ9H1D1 
PFAMQ9H1D1 
ProdomQ9H1D1 
UniProtKBQ9H1D0.2TRPV6_HUMAN RecName: Full=Transient receptor potential cation channel subfamily V member 6; Short=TrpV6; AltName: Full=CaT-like; Short=CaT-L; AltName: Full=Calcium transport protein 1; Short=CaT1; Alt
InterProQ9H1D0.2 
PFAMQ9H1D0.2 
ProdomQ9H1D0.2 
UniProtKBQ8WXR8RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ8WXR8 
PFAMQ8WXR8 
ProdomQ8WXR8 
UniProtKBQ9H1D0RecName: Full=Transient receptor potential cation channel subfamily V member 6;Short=TrpV6;AltName: Full=CaT-like;Short=CaT-L;AltName: Full=Calcium transport protein 1;Short=CaT1;AltName: Full=Epithel
InterProQ9H1D0 
PFAMQ9H1D0 
ProdomQ9H1D0 
RefSeqNP_061116.2 transient receptor potential cation channel subfamily V member 6 [Homo sapiens]
PDB6E2FDTransient receptor potential cation channel subfamily V member 6
PDB6E2FCTransient receptor potential cation channel subfamily V member 6
PDB6E2FBTransient receptor potential cation channel subfamily V member 6
PDB6E2FATransient receptor potential cation channel subfamily V member 6
GenPept155081637Sequence 46 from patent US 7205108
GenPept158256846unnamed protein product
GenPept17483858AF365927_1 calcium transport protein CaT1
GenPept182887897Transient receptor potential cation channel, subfamily V, member 6
GenPept20145496transient receptor potential channel 6, subfamily V
GenPept21690505unnamed protein product
GenPept21690659unnamed protein product
GenPept22035788transient receptor potential cation channel subfamily V, member 6
GenPept28372396transient receptor potential cation channel, subfamily V, member 6
GenPept51094521transient receptor potential cation channel, subfamily V, member 6
GenPept62901469TRPV6_HUMAN RecName: Full=Transient receptor potential cation channel subfamily V member 6; Short=TrpV6; AltName: Full=CaT-like; Short=CaT-L; AltName: Full=Calcium transport protein 1; Short=CaT1; Alt
GenPept21314682 transient receptor potential cation channel subfamily V member 6 [Homo sapiens]
GenBankAAI60161.1 Transient receptor potential cation channel, subfamily V, member 6 [synthetic construct]
GenBankAAL40230.1AF365927_1 calcium transport protein CaT1 [Homo sapiens]
GenBankAAO38052.1 transient receptor potential cation channel, subfamily V, member 6 [Homo sapiens]
GenBankEAL23776.1 transient receptor potential cation channel, subfamily V, member 6 [Homo sapiens]
ENSEMBLENSP00000352358transient receptor potential cation channel, subfamily V, member 6 [Homo sapiens]
ENSEMBLENSP00000310825transient receptor potential cation channel, subfamily V, member 6 [Homo sapiens]
EMBLCAC20417.2 
EMBLCAD32311.1 
ENSEMBLENSP00000310825 
ENSEMBLENSP00000352358 
ENSEMBLENSP00000352358TDI sequence
ENSEMBLENSP00000352358 
UCSCGenomeBrowserQ9H1D0