University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A037YCW7
Original Database ID ref NP_416389.4
Organism Escherichia coli, Shigella boydii, etc.
Annotation subname: full=cytoplasmic protein
yecm {eco:0000313|embl:aje56309.1};subname:
fu ll=protein yecm {eco:0000313|embl:klx04747.1};subname:
full=protein y ...
Sequence Length 188

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region1-186
Protein Length188
Template PDB Code1k4nA
Template Region5-190
Sequence Identity100%
E-Value0
GA3411
MPQS2.25996
z-DOPE-2.07
TSVMod MethodMSALL
TSVMod RMSD0.412
TSVMod NO350.944
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1k4nstructural genomics, protein ec4020 ; SCOP: 72059
DBALI1k4nA 
CATH3.10.180.10 Domain: 1k4nA00 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 (98%)
JenaImageLibrary1k4n 
Target Sequence
UniProtKBU0CJ68SubName: Full=Protein yecM;
InterProU0CJ68 
PFAMU0CJ68 
ProdomU0CJ68 
UniProtKBA0A080IB07SubName: Full=Protein yecM {ECO:0000313|EMBL:KEO24023.1};
InterProA0A080IB07 
PFAMA0A080IB07 
ProdomA0A080IB07 
UniProtKBA0A0E1M303SubName: Full=Putative metal-binding enzyme {ECO:0000313|EMBL:AJF56774.1};
InterProA0A0E1M303 
PFAMA0A0E1M303 
ProdomA0A0E1M303 
UniProtKBA0A0E3N139SubName: Full=Protein YecM {ECO:0000313|EMBL:AKA90895.1};
InterProA0A0E3N139 
PFAMA0A0E3N139 
ProdomA0A0E3N139 
UniProtKBA0A0G3HGQ9SubName: Full=Putative metal-binding enzyme protein {ECO:0000313|EMBL:AKK12489.1};
InterProA0A0G3HGQ9 
PFAMA0A0G3HGQ9 
ProdomA0A0G3HGQ9 
UniProtKBL3ZY15SubName: Full=Protein yecM;
InterProL3ZY15 
PFAML3ZY15 
ProdomL3ZY15 
UniProtKBL4JP83SubName: Full=Protein yecM;
InterProL4JP83 
PFAML4JP83 
ProdomL4JP83 
UniProtKBL4P1W9SubName: Full=Protein yecM;
InterProL4P1W9 
PFAML4P1W9 
ProdomL4P1W9 
UniProtKBL4WI34SubName: Full=Protein yecM;
InterProL4WI34 
PFAML4WI34 
ProdomL4WI34 
UniProtKBM2NSU7SubName: Full=Uncharacterized protein;
InterProM2NSU7 
PFAMM2NSU7 
ProdomM2NSU7 
UniProtKBM7UHR3SubName: Full=Putative metal-binding enzyme;
InterProM7UHR3 
PFAMM7UHR3 
ProdomM7UHR3 
UniProtKBA0A080GWN5SubName: Full=Protein yecM {ECO:0000313|EMBL:KEN90370.1};
InterProA0A080GWN5 
PFAMA0A080GWN5 
ProdomA0A080GWN5 
UniProtKBA0A079FQA0SubName: Full=Protein yecM {ECO:0000313|EMBL:KDY63059.1};
InterProA0A079FQA0 
PFAMA0A079FQA0 
ProdomA0A079FQA0 
UniProtKBA0A079FFL9SubName: Full=Protein yecM {ECO:0000313|EMBL:KDY53503.1};
InterProA0A079FFL9 
PFAMA0A079FFL9 
ProdomA0A079FFL9 
UniProtKBI4TAY6SubName: Full=Uncharacterized protein;
InterProI4TAY6 
PFAMI4TAY6 
ProdomI4TAY6 
UniProtKBA0A037YCW7SubName: Full=Cytoplasmic protein YecM {ECO:0000313|EMBL:AJE56309.1};SubName: Full=Protein YecM {ECO:0000313|EMBL:KLX04747.1};SubName: Full=Protein yecM {ECO:0000313|EMBL:CEE07592.1};SubName: Full=Str
InterProA0A037YCW7 
PFAMA0A037YCW7 
ProdomA0A037YCW7 
UniProtKBA0A069XK42SubName: Full=Protein yecM {ECO:0000313|EMBL:KDU30123.1};
InterProA0A069XK42 
PFAMA0A069XK42 
ProdomA0A069XK42 
UniProtKBA0A069Z7J6SubName: Full=Protein yecM {ECO:0000313|EMBL:KDU55645.1};
InterProA0A069Z7J6 
PFAMA0A069Z7J6 
ProdomA0A069Z7J6 
UniProtKBA0A070T6K1SubName: Full=Protein yecM {ECO:0000313|EMBL:KDX21618.1};
InterProA0A070T6K1 
PFAMA0A070T6K1 
ProdomA0A070T6K1 
UniProtKBA0A070Y4D8SubName: Full=Protein yecM {ECO:0000313|EMBL:KDX86472.1};
InterProA0A070Y4D8 
PFAMA0A070Y4D8 
ProdomA0A070Y4D8 
UniProtKBA0A071AWM7SubName: Full=Protein yecM {ECO:0000313|EMBL:KDY60659.1};
InterProA0A071AWM7 
PFAMA0A071AWM7 
ProdomA0A071AWM7 
UniProtKBA0A073TIY9SubName: Full=Protein yecM {ECO:0000313|EMBL:KEL28572.1};
InterProA0A073TIY9 
PFAMA0A073TIY9 
ProdomA0A073TIY9 
UniProtKBA0A074HTR1SubName: Full=Protein yecM {ECO:0000313|EMBL:KEN98400.1};
InterProA0A074HTR1 
PFAMA0A074HTR1 
ProdomA0A074HTR1 
UniProtKBA0A079DBG5SubName: Full=Protein yecM {ECO:0000313|EMBL:KDY19359.1};
InterProA0A079DBG5 
PFAMA0A079DBG5 
ProdomA0A079DBG5 
UniProtKBN2KY49SubName: Full=Protein yecM;
InterProN2KY49 
PFAMN2KY49 
ProdomN2KY49 
UniProtKBN2RKX9SubName: Full=Protein yecM;
InterProN2RKX9 
PFAMN2RKX9 
ProdomN2RKX9 
UniProtKBL3QXU4SubName: Full=Protein yecM;
InterProL3QXU4 
PFAML3QXU4 
ProdomL3QXU4 
UniProtKBT7KE64SubName: Full=Protein yecM;
InterProT7KE64 
PFAMT7KE64 
ProdomT7KE64 
UniProtKBB1XHE3SubName: Full=Predicted metal-binding enzyme;
InterProB1XHE3 
PFAMB1XHE3 
ProdomB1XHE3 
UniProtKBT8YTL3SubName: Full=Protein yecM;
InterProT8YTL3 
PFAMT8YTL3 
ProdomT8YTL3 
UniProtKBC4ZQF9SubName: Full=Predicted metal-binding enzyme;
InterProC4ZQF9 
PFAMC4ZQF9 
ProdomC4ZQF9 
UniProtKBT8ZRX6SubName: Full=Protein yecM;
InterProT8ZRX6 
PFAMT8ZRX6 
ProdomT8ZRX6 
UniProtKBC9QT61SubName: Full=Uncharacterized protein;
InterProC9QT61 
PFAMC9QT61 
ProdomC9QT61 
UniProtKBD8AVF3SubName: Full=YecM protein {ECO:0000313|EMBL:EFK12868.1};
InterProD8AVF3 
PFAMD8AVF3 
ProdomD8AVF3 
UniProtKBT9KHD2SubName: Full=Protein yecM;
InterProT9KHD2 
PFAMT9KHD2 
ProdomT9KHD2 
UniProtKBD8B3G9SubName: Full=YecM protein {ECO:0000313|EMBL:EFJ66378.1};
InterProD8B3G9 
PFAMD8B3G9 
ProdomD8B3G9 
UniProtKBL3VU78SubName: Full=Protein yecM;
InterProL3VU78 
PFAML3VU78 
ProdomL3VU78 
UniProtKBE6B355SubName: Full=YecM family protein {ECO:0000313|EMBL:EFU98500.1};
InterProE6B355 
PFAME6B355 
ProdomE6B355 
UniProtKBS0UVF2SubName: Full=Protein yecM {ECO:0000313|EMBL:EOU59308.1};
InterProS0UVF2 
PFAMS0UVF2 
ProdomS0UVF2 
UniProtKBP52007RecName: Full=Protein YecM;
InterProP52007 
PFAMP52007 
ProdomP52007 
UniProtKBP52008RecName: Full=Protein YecM;
InterProP52008 
PFAMP52008 
ProdomP52008 
UniProtKBS0Y8S7SubName: Full=Protein yecM;
InterProS0Y8S7 
PFAMS0Y8S7 
ProdomS0Y8S7 
UniProtKBS0Z5Y9SubName: Full=Protein yecM;
InterProS0Z5Y9 
PFAMS0Z5Y9 
ProdomS0Z5Y9 
UniProtKBS0ZX50SubName: Full=Protein yecM;
InterProS0ZX50 
PFAMS0ZX50 
ProdomS0ZX50 
UniProtKBS1BLI6SubName: Full=Protein yecM;
InterProS1BLI6 
PFAMS1BLI6 
ProdomS1BLI6 
UniProtKBS1F574SubName: Full=Protein yecM;
InterProS1F574 
PFAMS1F574 
ProdomS1F574 
UniProtKBS1KF82SubName: Full=Protein yecM;
InterProS1KF82 
PFAMS1KF82 
ProdomS1KF82 
UniProtKBS1KVH3SubName: Full=Protein yecM;
InterProS1KVH3 
PFAMS1KVH3 
ProdomS1KVH3 
UniProtKBE1HMC4SubName: Full=YecM protein {ECO:0000313|EMBL:EFK90946.1};
InterProE1HMC4 
PFAME1HMC4 
ProdomE1HMC4 
UniProtKBT9NMH0SubName: Full=Protein yecM;
InterProT9NMH0 
PFAMT9NMH0 
ProdomT9NMH0 
UniProtKBH4WRT0SubName: Full=Protein yecM;
InterProH4WRT0 
PFAMH4WRT0 
ProdomH4WRT0 
UniProtKBL2Z8Q1SubName: Full=Protein yecM;
InterProL2Z8Q1 
PFAML2Z8Q1 
ProdomL2Z8Q1 
UniProtKBL3WX00SubName: Full=Protein yecM;
InterProL3WX00 
PFAML3WX00 
ProdomL3WX00 
UniProtKBG2AVZ8SubName: Full=YecM family protein;
InterProG2AVZ8 
PFAMG2AVZ8 
ProdomG2AVZ8 
UniProtKBG2CKZ8SubName: Full=YecM family protein;
InterProG2CKZ8 
PFAMG2CKZ8 
ProdomG2CKZ8 
UniProtKBL3RI93SubName: Full=Protein yecM;
InterProL3RI93 
PFAML3RI93 
ProdomL3RI93 
UniProtKBS1LWI1SubName: Full=Protein yecM;
InterProS1LWI1 
PFAMS1LWI1 
ProdomS1LWI1 
UniProtKBH4VHC9SubName: Full=Protein yecM;
InterProH4VHC9 
PFAMH4VHC9 
ProdomH4VHC9 
UniProtKBT8X6U3SubName: Full=Protein yecM {ECO:0000313|EMBL:EQX52577.1};
InterProT8X6U3 
PFAMT8X6U3 
ProdomT8X6U3 
UniProtKBH4YGW5SubName: Full=Protein yecM;
InterProH4YGW5 
PFAMH4YGW5 
ProdomH4YGW5 
UniProtKBI2R2H8SubName: Full=Protein yecM;
InterProI2R2H8 
PFAMI2R2H8 
ProdomI2R2H8 
UniProtKBK3I1R9SubName: Full=Protein yecM;
InterProK3I1R9 
PFAMK3I1R9 
ProdomK3I1R9 
UniProtKBI4JAT7SubName: Full=Protein yecM {ECO:0000313|EMBL:EIF86346.1};
InterProI4JAT7 
PFAMI4JAT7 
ProdomI4JAT7 
UniProtKBT9MLZ1SubName: Full=Protein yecM;
InterProT9MLZ1 
PFAMT9MLZ1 
ProdomT9MLZ1 
UniProtKBH4Y1Y6SubName: Full=YecM family protein;
InterProH4Y1Y6 
PFAMH4Y1Y6 
ProdomH4Y1Y6 
UniProtKBT9J686SubName: Full=Protein yecM;
InterProT9J686 
PFAMT9J686 
ProdomT9J686 
UniProtKBL3VHM2SubName: Full=Protein yecM;
InterProL3VHM2 
PFAML3VHM2 
ProdomL3VHM2 
UniProtKBH0QAG4SubName: Full=Predicted metal-binding enzyme;
InterProH0QAG4 
PFAMH0QAG4 
ProdomH0QAG4 
UniProtKBI2P6P4SubName: Full=Protein yecM;
InterProI2P6P4 
PFAMI2P6P4 
ProdomI2P6P4 
UniProtKBK3HU35SubName: Full=Protein yecM;
InterProK3HU35 
PFAMK3HU35 
ProdomK3HU35 
UniProtKBF9QUP1SubName: Full=Putative uncharacterized protein;
InterProF9QUP1 
PFAMF9QUP1 
ProdomF9QUP1 
UniProtKBN2F0R7SubName: Full=Protein yecM;
InterProN2F0R7 
PFAMN2F0R7 
ProdomN2F0R7 
UniProtKBH4V215SubName: Full=YecM family protein {ECO:0000313|EMBL:EHV57377.1};
InterProH4V215 
PFAMH4V215 
ProdomH4V215 
UniProtKBT6JRG8SubName: Full=Protein yecM;
InterProT6JRG8 
PFAMT6JRG8 
ProdomT6JRG8 
UniProtKBU0D1A5SubName: Full=Protein yecM;
InterProU0D1A5 
PFAMU0D1A5 
ProdomU0D1A5 
UniProtKBT9V171SubName: Full=Protein yecM;
InterProT9V171 
PFAMT9V171 
ProdomT9V171 
UniProtKBI6G598SubName: Full=Protein yecM;
InterProI6G598 
PFAMI6G598 
ProdomI6G598 
UniProtKBH4UKC7SubName: Full=Protein yecM {ECO:0000313|EMBL:EHV58494.1};
InterProH4UKC7 
PFAMH4UKC7 
ProdomH4UKC7 
UniProtKBS1CE53SubName: Full=Protein yecM;
InterProS1CE53 
PFAMS1CE53 
ProdomS1CE53 
UniProtKBT5SFZ8SubName: Full=Protein yecM;
InterProT5SFZ8 
PFAMT5SFZ8 
ProdomT5SFZ8 
UniProtKBT7HP06SubName: Full=Protein yecM;
InterProT7HP06 
PFAMT7HP06 
ProdomT7HP06 
UniProtKBH4XLS0SubName: Full=YecM family protein;
InterProH4XLS0 
PFAMH4XLS0 
ProdomH4XLS0 
UniProtKBS1PEK2SubName: Full=Protein yecM;
InterProS1PEK2 
PFAMS1PEK2 
ProdomS1PEK2 
UniProtKBP76295RecName: Full=Protein YecM;
InterProP76295 
PFAMP76295 
ProdomP76295 
UniProtKBI2IA82SubName: Full=Uncharacterized protein;
InterProI2IA82 
PFAMI2IA82 
ProdomI2IA82 
UniProtKBT9LPB9SubName: Full=Protein yecM;
InterProT9LPB9 
PFAMT9LPB9 
ProdomT9LPB9 
UniProtKBI2X9G7SubName: Full=YecM protein {ECO:0000313|EMBL:EII45637.1};
InterProI2X9G7 
PFAMI2X9G7 
ProdomI2X9G7 
UniProtKBS0UT42SubName: Full=Protein yecM;
InterProS0UT42 
PFAMS0UT42 
ProdomS0UT42 
UniProtKBG2EXY0SubName: Full=Putative uncharacterized protein;
InterProG2EXY0 
PFAMG2EXY0 
ProdomG2EXY0 
UniProtKBK5G0Z5SubName: Full=Protein yecM;
InterProK5G0Z5 
PFAMK5G0Z5 
ProdomK5G0Z5 
UniProtKBK5H162SubName: Full=Protein yecM;
InterProK5H162 
PFAMK5H162 
ProdomK5H162 
UniProtKBL3KPI0SubName: Full=Protein yecM {ECO:0000313|EMBL:ELE00297.1};
InterProL3KPI0 
PFAML3KPI0 
ProdomL3KPI0 
UniProtKBL3LGY3SubName: Full=Protein yecM;
InterProL3LGY3 
PFAML3LGY3 
ProdomL3LGY3 
UniProtKBG0F8B9SubName: Full=YecM family protein {ECO:0000313|EMBL:AEJ56974.1};
InterProG0F8B9 
PFAMG0F8B9 
ProdomG0F8B9 
UniProtKBL3TS53SubName: Full=Protein yecM;
InterProL3TS53 
PFAML3TS53 
ProdomL3TS53 
UniProtKBL5DHC2SubName: Full=Protein yecM;
InterProL5DHC2 
PFAML5DHC2 
ProdomL5DHC2 
UniProtKBG2BAE6SubName: Full=YecM family protein;
InterProG2BAE6 
PFAMG2BAE6 
ProdomG2BAE6 
UniProtKBM7VSL1SubName: Full=Putative metal-binding enzyme;
InterProM7VSL1 
PFAMM7VSL1 
ProdomM7VSL1 
UniProtKBG2CZJ9SubName: Full=YecM family protein;
InterProG2CZJ9 
PFAMG2CZJ9 
ProdomG2CZJ9 
UniProtKBI2ZQ73SubName: Full=YecM protein;
InterProI2ZQ73 
PFAMI2ZQ73 
ProdomI2ZQ73