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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link B2R5Z7
Original Database ID gi 4506325
Organism Homo sapiens
Annotation subname: full=cdna, flj92701,
homo sapiens protein tyrosine
phosphatase, recepto r type, r(ptprr),
transcript variant 1, mrna;
Sequence Length 657

Dataset Information:

The newest dataset for this sequence was created on 2008-11-05. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region375-655
Protein Length657
Template PDB Code2a8bA
Template Region375-655
Sequence Identity100%
E-Value 0
GA3411
MPQS1.72
z-DOPE-2.04
TSVMod MethodNO3.5S
TSVMod RMSD
TSVMod NO350.964499
Datasethuman_2008
ModPipe Version2.0.2
Model Date2008-11-05

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2a8bcrystal structure of the catalytic domain of human tyrosine phosphatase receptor, type r
DBALI2a8bA 
JenaImageLibrary2a8b 
Target Sequence
UniProtKBB2R5Z7SubName: Full=cDNA, FLJ92701, Homo sapiens protein tyrosine phosphatase, receptor type, R(PTPRR), transcript variant 1, mRNA;
InterProB2R5Z7 
PFAMB2R5Z7 
ProdomB2R5Z7 
UniProtKBQ15256Receptor-type tyrosine-protein phosphatase R precursor (EC 3.1.3.48)DE (Protein-tyrosine phosphatase PCPTP1) (NC-PTPCOM1) (Ch-1PTPase)
InterProQ15256 
PFAMQ15256 
ProdomQ15256 
RefSeqNP_002840.1 receptor-type tyrosine-protein phosphatase R isoform 1 precursor [Homo sapiens]
GenPept984625tyrosine phosphatase
GenPept915839999Sequence 121 from patent US 9012145
GenPept568558304Sequence 53754 from patent US 8586006
GenPept4506325 receptor-type tyrosine-protein phosphatase R isoform 1 precursor [Homo sapiens]
GenPept4096844protein tyrosine phosphatase Cr1PTPase precursor
GenPept353304856Sequence 121 from patent US 8039210
GenPept314581088Sequence 8 from patent US 7816082
GenPept189065455unnamed protein product
GenPept12043772protein tyrosine phosphatase receptor type R
GenBankAAD09447.1 protein tyrosine phosphatase Cr1PTPase precursor [Homo sapiens]
GenBankAAG47642.1 protein tyrosine phosphatase receptor type R [Homo sapiens]
UCSCGenomeBrowserQ15256