University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 606014
Original Database ID GI 167296759
Organism Escherichia coli, Escherichia coli K-12
Annotation phospho-beta-d-galactosidase;
alpha-subunit
Sequence Length 1042

Dataset Information:

The newest dataset for this sequence was created on 2014-11-04. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region18-1009
Protein Length1042
Template PDB Code3obaA
Template Region11-1022
Sequence Identity37%
E-Value0
GA3411
MPQS1.30232
z-DOPE-0.08
TSVMod MethodMSRED
TSVMod RMSD6.018
TSVMod NO350.714
DatasetMW-EFI_update_D71
ModPipe VersionSVN.r1597
Model Date2014-11-04

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3oba
DBALI3obaA 
JenaImageLibrary3oba 
Target Sequence
GenPept16130971 (NC_000913) evolved beta-D-galactosidase, alpha subunit; cryptic gene [Escherichia coli K12]
GenPept167296759Sequence 23561 from patent US 7314974
GenPept1789457evolved beta-D-galactosidase, alpha subunit; cryptic gene
GenPept606014phospho-beta-D-galactosidase; alpha-subunit
GenPept7428188GBECE beta-galactosidase (EC 3.2.1.23) alpha chain - Escherichia coli
GenBankAAA57877.1 phospho-beta-D-galactosidase; alpha-subunit [Escherichia coli str. K-12 substr. MG1655]