University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 9257128
Original Database ID TR MURD_ECOLI
Organism Escherichia coli
Annotation a chain a, udp-n-acetylmuramoyl-l-alanine:d-glutamate
ligase
Sequence Length 437

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region1-437
Protein Length437
Template PDB Code4uagA
Template Region1-437
Sequence Identity98%
E-Value1e-117
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4uagudp-n-acetylmuramoyl-l-alanine:d-glutamate ligase ; EC: 6.3.2.9 ; PFAM: PF01225 PF02875 ; SCOP: 30651 33952 34955
DBALI4uagA 
CATH3.40.50.720 Domain: 4uagA01 NAD(P)-binding Rossmann-like Domain (100%)
CATH3.40.1190.10 Domain: 4uagA02 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase (100%)
CATH3.90.190.20 Domain: 4uagA03 Protein-Tyrosine Phosphatase; Chain A (100%)
JenaImageLibrary4uag 
Target Sequence
UniProtKBP14900UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (UDP-N-DE acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-DE adding enzyme)
InterProP14900 
PFAMP14900 
ProdomP14900 
PDB1E0DA Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
PDB1E0DAChain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
PDB1EEHA Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
PDB1EEHAChain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
GenPept13096498A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
GenPept9257128A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase