University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 300300
Original Database ID gi 300300
Organism Homo sapiens
Annotation ccaat displacement protein, cdp
Sequence Length 1505

Dataset Information:

The newest dataset for this sequence was created on 2006-11-28. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1207-1302
Protein Length1505
Template PDB Code1e3oC
Template Region36-159
Sequence Identity18%
E-Value2e-05
GA3410.42
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1e3ocrystal structure of oct-1 pou dimer bound to more ; PFAM: PF00046 PF00157 ; SCOP: 59197 59198
DBALI1e3oC 
CATH1.10.260.40 Domain: 1e3oC01 lambda repressor-like DNA-binding domains (56%)
CATH1.10.10.60 Domain: 1e3oC02 Homeodomain-like (100%)
JenaImageLibrary1e3o 
Target Sequence
UniProtKBP39880CCAAT displacement protein (CDP) (Cut-like 1)
InterProP39880 
PFAMP39880 
ProdomP39880 
GenPept300300CCAAT displacement protein, CDP
GenPept53972090Sequence 1102 from patent US 6753314
GenPept729094CUT1_HUMAN CCAAT DISPLACEMENT PROTEIN (CDP) (CUT-LIKE 1)
GenBankAAB26579.1 CCAAT displacement protein, CDP [human, Peptide, 1505 aa]
UCSCGenomeBrowserP39880