University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P76129.4
Original Database ID ref NP_416006.4
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation dosp_ecoli recname: full=oxygen
sensor protein dosp; altname:
full=direct oxygen sensing phosphodiesterase;
short=direct oxygen sensor protein;
altna ...
Sequence Length 799

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region531-799
Protein Length799
Template PDB Code4hu3A
Template Region531-799
Sequence Identity100%
E-Value0
GA3411
MPQS1.56137
z-DOPE-1.35
TSVMod MethodMSALL
TSVMod RMSD0.537
TSVMod NO350.963
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4hu3
DBALI4hu3A 
JenaImageLibrary4hu3 
Target Sequence
UniProtKBE3PLY9SubName: Full=Heme-regulated cyclic AMP phosphodiesterase (Direct oxygen sensor protein) {ECO:0000313|EMBL:CBJ01063.1};
InterProE3PLY9 
PFAME3PLY9 
ProdomE3PLY9 
UniProtKBA0A0G3I2L9SubName: Full=Oxygen sensor {ECO:0000313|EMBL:AKK17607.1};
InterProA0A0G3I2L9 
PFAMA0A0G3I2L9 
ProdomA0A0G3I2L9 
UniProtKBU0D4N2SubName: Full=Oxygen sensor protein DosP;
InterProU0D4N2 
PFAMU0D4N2 
ProdomU0D4N2 
UniProtKBT9N043SubName: Full=Oxygen sensor protein DosP;
InterProT9N043 
PFAMT9N043 
ProdomT9N043 
UniProtKBT9MP03SubName: Full=Oxygen sensor protein DosP;
InterProT9MP03 
PFAMT9MP03 
ProdomT9MP03 
UniProtKBT9HZG9SubName: Full=Oxygen sensor protein DosP;
InterProT9HZG9 
PFAMT9HZG9 
ProdomT9HZG9 
UniProtKBT9AYZ8SubName: Full=Oxygen sensor protein DosP;
InterProT9AYZ8 
PFAMT9AYZ8 
ProdomT9AYZ8 
UniProtKBI2R3N7SubName: Full=Oxygen sensor protein DosP;
InterProI2R3N7 
PFAMI2R3N7 
ProdomI2R3N7 
UniProtKBA0A0E1LX10SubName: Full=Oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated {ECO:0000313|EMBL:AJF56321.1};EC=3.1.4.52 {ECO:0000313|EMBL:AJF56321.1};
InterProA0A0E1LX10 
PFAMA0A0E1LX10 
ProdomA0A0E1LX10 
UniProtKBI4JA01SubName: Full=Oxygen sensor protein DosP {ECO:0000313|EMBL:EIF86060.1};
InterProI4JA01 
PFAMI4JA01 
ProdomI4JA01 
UniProtKBK3I3U2SubName: Full=Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase;EC=3.1.4.-;
InterProK3I3U2 
PFAMK3I3U2 
ProdomK3I3U2 
UniProtKBS1PH79SubName: Full=Oxygen sensor protein DosP;
InterProS1PH79 
PFAMS1PH79 
ProdomS1PH79 
UniProtKBI2HZ69SubName: Full=Cyclic-di-GMP phosphodiesterase;
InterProI2HZ69 
PFAMI2HZ69 
ProdomI2HZ69 
UniProtKBH9USK5SubName: Full=Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase {ECO:0000313|EMBL:AFG40498.1};
InterProH9USK5 
PFAMH9USK5 
ProdomH9USK5 
UniProtKBC9QVX9SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S);SubName: Full=cAMP phosphodiesterase;
InterProC9QVX9 
PFAMC9QVX9 
ProdomC9QVX9 
UniProtKBC4ZWQ8SubName: Full=cAMP phosphodiesterase, heme-regulated;
InterProC4ZWQ8 
PFAMC4ZWQ8 
ProdomC4ZWQ8 
UniProtKBF9R5T3SubName: Full=Cyclic-di-GMP phosphodiesterase;
InterProF9R5T3 
PFAMF9R5T3 
ProdomF9R5T3 
UniProtKBB1XE80SubName: Full=cAMP phosphodiesterase, heme-regulated;
InterProB1XE80 
PFAMB1XE80 
ProdomB1XE80 
UniProtKBG2CM15SubName: Full=Putative enzyme;
InterProG2CM15 
PFAMG2CM15 
ProdomG2CM15 
UniProtKBS1LYW5SubName: Full=Oxygen sensor protein DosP;
InterProS1LYW5 
PFAMS1LYW5 
ProdomS1LYW5 
UniProtKBS1KGW8SubName: Full=Oxygen sensor protein DosP;
InterProS1KGW8 
PFAMS1KGW8 
ProdomS1KGW8 
UniProtKBS1K7S3SubName: Full=Oxygen sensor protein DosP;
InterProS1K7S3 
PFAMS1K7S3 
ProdomS1K7S3 
UniProtKBG2F8B1SubName: Full=Cyclic-di-GMP phosphodiesterase;
InterProG2F8B1 
PFAMG2F8B1 
ProdomG2F8B1 
UniProtKBH0QCT3SubName: Full=cAMP phosphodiesterase, heme-regulated;
InterProH0QCT3 
PFAMH0QCT3 
ProdomH0QCT3 
UniProtKBL2Z9U0SubName: Full=Oxygen sensor protein DosP;
InterProL2Z9U0 
PFAML2Z9U0 
ProdomL2Z9U0 
UniProtKBL3RL31SubName: Full=Oxygen sensor protein DosP;
InterProL3RL31 
PFAML3RL31 
ProdomL3RL31 
UniProtKBL3UJH0SubName: Full=Oxygen sensor protein DosP;
InterProL3UJH0 
PFAML3UJH0 
ProdomL3UJH0 
UniProtKBN4FZB6SubName: Full=Oxygen sensor protein DosP;EC=3.1.4.52;
InterProN4FZB6 
PFAMN4FZB6 
ProdomN4FZB6 
UniProtKBP76129RecName: Full=Oxygen sensor protein DosP;EC=3.1.4.52;AltName: Full=Direct oxygen-sensing phosphodiesterase;Short=Direct oxygen sensor protein;AltName: Full=Ec DOS;AltName: Full=Heme-regulated cyclic d
InterProP76129 
PFAMP76129 
ProdomP76129 
UniProtKBP76872RecName: Full=Oxygen sensor protein DosP;EC=3.1.4.52;AltName: Full=Direct oxygen-sensing phosphodiesterase;Short=Direct oxygen sensor protein;AltName: Full=Ec DOS;AltName: Full=Heme-regulated cyclic d
InterProP76872 
PFAMP76872 
ProdomP76872 
UniProtKBT9U928SubName: Full=Oxygen sensor protein DosP;
InterProT9U928 
PFAMT9U928 
ProdomT9U928 
UniProtKBT8SN97SubName: Full=Oxygen sensor protein DosP;
InterProT8SN97 
PFAMT8SN97 
ProdomT8SN97 
UniProtKBP77708RecName: Full=Oxygen sensor protein DosP;EC=3.1.4.52;AltName: Full=Direct oxygen-sensing phosphodiesterase;Short=Direct oxygen sensor protein;AltName: Full=Ec DOS;AltName: Full=Heme-regulated cyclic d
InterProP77708 
PFAMP77708 
ProdomP77708 
UniProtKBS0UEK6SubName: Full=Oxygen sensor protein DosP;
InterProS0UEK6 
PFAMS0UEK6 
ProdomS0UEK6 
UniProtKBS0W284SubName: Full=Oxygen sensor protein DosP {ECO:0000313|EMBL:EOU67852.1};
InterProS0W284 
PFAMS0W284 
ProdomS0W284 
UniProtKBT7ZEK3SubName: Full=Oxygen sensor protein DosP;
InterProT7ZEK3 
PFAMT7ZEK3 
ProdomT7ZEK3 
UniProtKBS0YDI9SubName: Full=Oxygen sensor protein DosP;
InterProS0YDI9 
PFAMS0YDI9 
ProdomS0YDI9 
UniProtKBT2N659SubName: Full=Oxygen sensor protein DosP;
InterProT2N659 
PFAMT2N659 
ProdomT2N659 
UniProtKBS1CGX0SubName: Full=Oxygen sensor protein DosP;
InterProS1CGX0 
PFAMS1CGX0 
ProdomS1CGX0 
UniProtKBS0Z7I9SubName: Full=Oxygen sensor protein DosP;
InterProS0Z7I9 
PFAMS0Z7I9 
ProdomS0Z7I9 
UniProtKBL3VIE3SubName: Full=Oxygen sensor protein DosP;
InterProL3VIE3 
PFAML3VIE3 
ProdomL3VIE3 
UniProtKBL3VVV7SubName: Full=Oxygen sensor protein DosP;
InterProL3VVV7 
PFAML3VVV7 
ProdomL3VVV7 
UniProtKBL3X1S7SubName: Full=Oxygen sensor protein DosP;
InterProL3X1S7 
PFAML3X1S7 
ProdomL3X1S7 
UniProtKBL4P0G8SubName: Full=Oxygen sensor protein DosP;
InterProL4P0G8 
PFAML4P0G8 
ProdomL4P0G8 
UniProtKBM7V5I8SubName: Full=cAMP phosphodiesterase, heme-regulated;
InterProM7V5I8 
PFAMM7V5I8 
ProdomM7V5I8 
UniProtKBW8SZ27SubName: Full=Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase {ECO:0000313|EMBL:KGM81898.1};EC=3.1.4.- {ECO:0000313|EMBL:KGM81898.1};SubName: Full=Oxygen sensor protein DosP {ECO:0000313|EM
InterProW8SZ27 
PFAMW8SZ27 
ProdomW8SZ27 
UniProtKBU0D393SubName: Full=Oxygen sensor protein DosP;
InterProU0D393 
PFAMU0D393 
ProdomU0D393 
UniProtKBT9JNE0SubName: Full=Oxygen sensor protein DosP;
InterProT9JNE0 
PFAMT9JNE0 
ProdomT9JNE0 
UniProtKBT8YXK4SubName: Full=Oxygen sensor protein DosP;
InterProT8YXK4 
PFAMT8YXK4 
ProdomT8YXK4 
UniProtKBN2EBE8SubName: Full=Oxygen sensor protein DosP;EC=3.1.4.52;
InterProN2EBE8 
PFAMN2EBE8 
ProdomN2EBE8 
UniProtKBM7VTK5SubName: Full=cAMP phosphodiesterase, heme-regulated;
InterProM7VTK5 
PFAMM7VTK5 
ProdomM7VTK5 
UniProtKBF9R5T3SubName: Full=Cyclic-di-GMP phosphodiesterase;
InterProF9R5T3 
PFAMF9R5T3 
ProdomF9R5T3 
UniProtKBI2HZ69SubName: Full=Cyclic-di-GMP phosphodiesterase;
InterProI2HZ69 
PFAMI2HZ69 
ProdomI2HZ69 
UniProtKBH9USK5SubName: Full=Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase;
InterProH9USK5 
PFAMH9USK5 
ProdomH9USK5 
UniProtKBG2CM15SubName: Full=Putative enzyme;
InterProG2CM15 
PFAMG2CM15 
ProdomG2CM15 
UniProtKBI4JA01SubName: Full=Oxygen sensor protein DosP;
InterProI4JA01 
PFAMI4JA01 
ProdomI4JA01 
UniProtKBG2F8B1SubName: Full=Cyclic-di-GMP phosphodiesterase;
InterProG2F8B1 
PFAMG2F8B1 
ProdomG2F8B1 
UniProtKBH0QCT3SubName: Full=cAMP phosphodiesterase, heme-regulated;
InterProH0QCT3 
PFAMH0QCT3 
ProdomH0QCT3 
UniProtKBI2R3N7SubName: Full=Oxygen sensor protein DosP;
InterProI2R3N7 
PFAMI2R3N7 
ProdomI2R3N7 
UniProtKBE3PLY9SubName: Full=Heme-regulated cyclic AMP phosphodiesterase (Direct oxygen sensor protein);
InterProE3PLY9 
PFAME3PLY9 
ProdomE3PLY9 
UniProtKBC9QVX9SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S);SubName: Full=cAMP phosphodiesterase;
InterProC9QVX9 
PFAMC9QVX9 
ProdomC9QVX9 
UniProtKBA0A7B5MEI4SubName: Full=Oxygen sensor protein DosP {ECO:0000313|EMBL:HAJ6404246.1}
InterProA0A7B5MEI4 
PFAMA0A7B5MEI4 
ProdomA0A7B5MEI4 
UniProtKBA0A7D4MAP2SubName: Full=Oxygen-sensing cyclic-di-GMP phosphodiesterase {ECO:0000313|EMBL:QKI48613.1}EC=3.1.4.52 {ECO:0000313|EMBL:QKI48613.1}
InterProA0A7D4MAP2 
PFAMA0A7D4MAP2 
ProdomA0A7D4MAP2 
UniProtKBA0A829AM18SubName: Full=Oxygen sensor protein DosP {ECO:0000313|EMBL:ELF09449.1}
InterProA0A829AM18 
PFAMA0A829AM18 
ProdomA0A829AM18 
UniProtKBA0A829FTL8SubName: Full=Oxygen sensor protein DosP {ECO:0000313|EMBL:EOU67852.1}
InterProA0A829FTL8 
PFAMA0A829FTL8 
ProdomA0A829FTL8 
UniProtKBA0A8A5IAB6SubName: Full=Oxygen-sensing cyclic-di-GMP phosphodiesterase {ECO:0000313|EMBL:QTF39031.1}EC=3.1.4.52 {ECO:0000313|EMBL:QTF39031.1}
InterProA0A8A5IAB6 
PFAMA0A8A5IAB6 
ProdomA0A8A5IAB6 
UniProtKBA0A8F8DFX8SubName: Full=Oxygen-sensing cyclic-di-GMP phosphodiesterase {ECO:0000313|EMBL:QXZ35014.1}EC=3.1.4.52 {ECO:0000313|EMBL:QXZ35014.1}
InterProA0A8F8DFX8 
PFAMA0A8F8DFX8 
ProdomA0A8F8DFX8 
UniProtKBA0A8F9I822SubName: Full=Oxygen-sensing cyclic-di-GMP phosphodiesterase {ECO:0000313|EMBL:QYE41692.1}EC=3.1.4.52 {ECO:0000313|EMBL:QYE41692.1}
InterProA0A8F9I822 
PFAMA0A8F9I822 
ProdomA0A8F9I822 
UniProtKBA0A8F9MP91SubName: Full=Oxygen-sensing cyclic-di-GMP phosphodiesterase {ECO:0000313|EMBL:QYE23806.1}EC=3.1.4.52 {ECO:0000313|EMBL:QYE23806.1}
InterProA0A8F9MP91 
PFAMA0A8F9MP91 
ProdomA0A8F9MP91 
UniProtKBA0A5Q3TAB4Anti-FlhC(2)FlhD(4) factor YdiV {ECO:0000256|ARBA:ARBA00018009}
InterProA0A5Q3TAB4 
PFAMA0A5Q3TAB4 
ProdomA0A5Q3TAB4 
UniProtKBB1XE80SubName: Full=cAMP phosphodiesterase, heme-regulated;
InterProB1XE80 
PFAMB1XE80 
ProdomB1XE80 
UniProtKBC4ZWQ8SubName: Full=cAMP phosphodiesterase, heme-regulated;
InterProC4ZWQ8 
PFAMC4ZWQ8 
ProdomC4ZWQ8 
UniProtKBP77708RecName: Full=Oxygen sensor protein DosP;EC=3.1.4.52;AltName: Full=Direct oxygen-sensing phosphodiesterase;Short=Direct oxygen sensor protein;AltName: Full=Ec DOS;AltName: Full=Heme-regulated cyclic d
InterProP77708 
PFAMP77708 
ProdomP77708 
UniProtKBP76872RecName: Full=Oxygen sensor protein DosP;EC=3.1.4.52;AltName: Full=Direct oxygen-sensing phosphodiesterase;Short=Direct oxygen sensor protein;AltName: Full=Ec DOS;AltName: Full=Heme-regulated cyclic d
InterProP76872 
PFAMP76872 
ProdomP76872 
UniProtKBP76129.4DOSP_ECOLI RecName: Full=Oxygen sensor protein DosP; AltName: Full=Direct oxygen sensing phosphodiesterase; Short=Direct oxygen sensor protein; AltName: Full=Ec DOS; AltName: Full=Heme-regulated cycli
InterProP76129.4 
PFAMP76129.4 
ProdomP76129.4 
UniProtKBP76129RecName: Full=Oxygen sensor protein DosP;EC=3.1.4.52;AltName: Full=Direct oxygen-sensing phosphodiesterase;Short=Direct oxygen sensor protein;AltName: Full=Ec DOS;AltName: Full=Heme-regulated cyclic d
InterProP76129 
PFAMP76129 
ProdomP76129 
RefSeqNP_416006.4 oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_001730480.1 cAMP phosphodiesterase, heme-regulated [Escherichia coli str. K-12 substr. DH10B]
RefSeqAP_002112.1 cAMP phosphodiesterase, heme-regulated [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002926507.1 cAMP phosphodiesterase, heme-regulated [Escherichia coli BW2952]
GenPept383102989Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase
GenPept238860101cAMP phosphodiesterase, heme-regulated
GenPept1742447Sensor protein FixL (EC 2.7.3.-)
GenPept169888995cAMP phosphodiesterase, heme-regulated
GenPept161789062DOSP_ECOLI RecName: Full=Oxygen sensor protein DosP; AltName: Full=Direct oxygen sensing phosphodiesterase; Short=Direct oxygen sensor protein; AltName: Full=Ec DOS; AltName: Full=Heme-regulated cycli
GenPept315136129cAMP phosphodiesterase
GenPept359332012cAMP phosphodiesterase, heme-regulated
GenPept3915427YDDU_ECOLI HYPOTHETICAL 90.3 KDA PROTEIN IN OSMC-GADC INTERGENIC REGION
GenPept817583065oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated, cold- and stationary phase-induced bioflim regulator
GenPept817578926oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated, cold- and stationary phase-induced bioflim regulator
GenPept817574784oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated, cold- and stationary phase-induced bioflim regulator
GenPept802134975oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold-and stationary phase-induced bioflim regulator
GenPept751380494oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated
GenPept731470404oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator
GenPept730582675oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator
GenPept687676642c-di-GMP phosphodiesterase, heme-regulated, subunit of DosC-DosP complex
GenPept687672367c-di-GMP phosphodiesterase, heme-regulated, subunit of DosC-DosP complex
GenPept682119009oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator
GenPept664683830c-di-GMP phosphodiesterase
GenPept549812968oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator