University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A8K2W5
Original Database ID EN ENSP00000362768.3
Organism Homo sapiens
Annotation subname: full=cdna flj76705, highly
similar to homo sapiens retinoblastoma-like
1 (p107) (rbl1), transcript variant
1, mrna;subname: full=retinoblast
...
Sequence Length 1068

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region17-949
Protein Length1068
Template PDB Code4eljA
Template Region53-771
Sequence Identity33%
E-Value0
GA3411
MPQS0.531395
z-DOPE1.32
TSVMod MethodMSRED
TSVMod RMSD27.698
TSVMod NO350.032
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4elj
DBALI4eljA 
JenaImageLibrary4elj 
Target Sequence
UniProtKBQ9H1M1RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProQ9H1M1 
PFAMQ9H1M1 
ProdomQ9H1M1 
UniProtKBP28749RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProP28749 
PFAMP28749 
ProdomP28749 
UniProtKBQ9H1L5RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProQ9H1L5 
PFAMQ9H1L5 
ProdomQ9H1L5 
UniProtKBA8K2W5RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProA8K2W5 
PFAMA8K2W5 
ProdomA8K2W5 
UniProtKBQ8N5K6RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProQ8N5K6 
PFAMQ8N5K6 
ProdomQ8N5K6 
UniProtKBQ4VXA0RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProQ4VXA0 
PFAMQ4VXA0 
ProdomQ4VXA0 
UniProtKBA8K2W5SubName: Full=cDNA FLJ76705, highly similar to Homo sapiens retinoblastoma-like 1 (p107) (RBL1), transcript variant 1, mRNA;SubName: Full=Retinoblastoma-like 1 (P107), isoform CRA_a;
InterProA8K2W5 
PFAMA8K2W5 
ProdomA8K2W5 
UniProtKBQ4VXA0Retinoblastoma-like 1 (P107)
InterProQ4VXA0 
PFAMQ4VXA0 
ProdomQ4VXA0 
UniProtKBQ4VXA0RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProQ4VXA0 
PFAMQ4VXA0 
ProdomQ4VXA0 
UniProtKBP28749.3RBL1_HUMAN RecName: Full=Retinoblastoma-like protein 1; AltName: Full=107 kDa retinoblastoma-associated protein; Short=p107; AltName: Full=pRb1
InterProP28749.3 
PFAMP28749.3 
ProdomP28749.3 
UniProtKBQ8N5K6RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProQ8N5K6 
PFAMQ8N5K6 
ProdomQ8N5K6 
UniProtKBA8K2W5RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProA8K2W5 
PFAMA8K2W5 
ProdomA8K2W5 
UniProtKBQ9H1L5RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProQ9H1L5 
PFAMQ9H1L5 
ProdomQ9H1L5 
UniProtKBQ9H1M1RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProQ9H1M1 
PFAMQ9H1M1 
ProdomQ9H1M1 
UniProtKBP28749RecName: Full=Retinoblastoma-like protein 1;AltName: Full=107 kDa retinoblastoma-associated protein;Short=p107;AltName: Full=pRb1;
InterProP28749 
PFAMP28749 
ProdomP28749 
RefSeqNP_002886.2 retinoblastoma-like protein 1 isoform a [Homo sapiens]
GenPept66347745retinoblastoma-like 1 (p107)
GenPept66347743retinoblastoma-like 1 (p107)
GenPept34577079 retinoblastoma-like protein 1 isoform a [Homo sapiens]
GenPept756900482Sequence 4 from patent US 8852579
GenPept90103515RBL1_HUMAN RecName: Full=Retinoblastoma-like protein 1; AltName: Full=107 kDa retinoblastoma-associated protein; Short=p107; AltName: Full=pRb1
GenPept168277456retinoblastoma-like protein 1, partial
GenPept158261783unnamed protein product
GenPept119596494retinoblastoma-like 1 (p107), isoform CRA_a
GenPept13653640 retinoblastoma-like 1 (p107) [Homo sapiens]
GenPept66347373retinoblastoma-like 1 (p107)
GenBankEAW76088.1 retinoblastoma-like 1 (p107), isoform CRA_a [Homo sapiens]
ENSEMBLENSP00000262877Retinoblastoma-like protein 1 (107 kDa retinoblastoma-associated protein) (PRB1) (P107). [Homo sapiens]
EMBLCAI95151.1 
EMBLCAI95177.1 
EMBLCAI95716.1 
ENSEMBLENSP00000262877 
ENSEMBLENSP00000262877TDI sequence
ENSEMBLENSP00000362768