University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1310978
Original Database ID UP P0AD61
Organism Escherichia coli
Annotation a chain a, pyruvate kinase from
e. coli in the t-state
Sequence Length 470

Dataset Information:

The newest dataset for this sequence was created on 2014-01-02. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-470
Protein Length470
Template PDB Code1pklG
Template Region18-497
Sequence Identity43%
E-Value1e-133
GA3411
DatasetTIMbarrel_templates
ModPipe VersionModPipe1.0
Model Date2003-05-28

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1pklthe structure of leishmania pyruvate kinase ; EC: 2.7.1.40 ; PFAM: PF00224 PF02887 ; SCOP: 27058 29286 33140
DBALI1pklG 
CATH3.40.1380.20 Domain: 1pklG01 Pyruvate Kinase; Chain: A, domain 1 (99%)
CATH3.20.20.60 Domain: 1pklG02 Phosphoenolpyruvate-binding domains (100%)
CATH2.40.33.10 Domain: 1pklG03 M1 Pyruvate Kinase; Domain 3 (100%)
JenaImageLibrary1pkl 
Target Sequence
SFLD1310978Structure Function Linkage Database entry: Member of the Nucleophilic Attack 6-bladed Beta-Propeller (N6P) superfamily.
PDB1PKYAChain A, Pyruvate Kinase From E. Coli In The T-State
PDB1PKYDChain D, Pyruvate Kinase From E. Coli In The T-State
PDB1PKYCChain C, Pyruvate Kinase From E. Coli In The T-State
PDB1PKYBChain B, Pyruvate Kinase From E. Coli In The T-State
PDB1PKYD Chain D, Pyruvate Kinase From E. Coli In The T-State
GenPept1310978A Chain A, Pyruvate Kinase From E. Coli In The T-State
GenPept1310981D Chain D, Pyruvate Kinase From E. Coli In The T-State
GenPept1310980C Chain C, Pyruvate Kinase From E. Coli In The T-State
GenPept1310979B Chain B, Pyruvate Kinase From E. Coli In The T-State
GenPept443758202Sequence 10499 from patent US 8343764